Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1345 ATGGCTTCTTTGCTTCTACTTATGCCTGGAACTATGCAGCTCGCAATTCACCCCACCAGAAAGTATACTGGAAGTTCATCATCAAGAGCTATGCAAGACTCACTTGGGATTCCTGCTTGCTTTTCTTCTGCAGAGAGGATCGATGATCATGGAGCTGTGACCCGTTCAGGTCAGAGCGTTTACATGTCTGTGTACAGAACAAAGATTGCTGATAATTGCCGCTTGATCACTGTCAACTGGTGCAAAAATTTGTTGCTTCATGGTCTATCAGTGTCAGTGGAAGGCTCAGAAGGAGAAACCCAGTATACCTGCAAGGTTGAGCTAAAGCCCTGGTACTTTTGGAGGAAACATGGTTCCAAGCGCTTCGTAGTAGATGGTAAGGCCGTTGATATCTTCTGGGACCTTAAAGCTGCAAAATTTAATGGCGAGACAGAACCAACCTCAGAGTACTATGTAGCAGTGGTTTGTGATGAAGAGATCGTGCTACTTCTTGGTGATCTAAAGAATGATGCCTACAAAAGGACTGGTTGCAGACCAGCTCTTATTGATCCTATTTTGGTTTCAAAGAAGGAGCACATATTTGGGAAGAAGAAGTTCTCCACTAGAGCTAAGTTCCTCGAGAAAGGTAGATGCCATGAGATCTCAATTGAGTGCAAGAACAAAGGTAATGGAGGGAGCACGAGAAACAGCGATTTGGTGAATGGGGTTCAACCAGAGATGGAGATAAGGATTGATGGGGATTTGGTCATTCATGTCAAGCATTTGCAGTGGAAATTTAGAGGCAACGAGTCAATTCATCTCAACAAAATGAGAGTAGAGGTATATTGGGATGTTCATGATTGGCTATTTAGTCCTGGTTTAAAGCATGCTTTATTCATTTTTAAGCCAATTATCTCATCTACTTCTCTAGCGTCCCCTCCATTATCATCTTCATCATCAACTCCTTTATCAGCTCACACAGGAAGTTCGGGTTCGGCGGAGGGATTTAGTGTTAGGGGGTCATCAGACTTTTGTTTGTTTCTCTATGCTTGGAAGGTTGAATGA 1044 0.432 MASLLLLMPGTMQLAIHPTRKYTGSSSSRAMQDSLGIPACFSSAERIDDHGAVTRSGQSVYMSVYRTKIADNCRLITVNWCKNLLLHGLSVSVEGSEGETQYTCKVELKPWYFWRKHGSKRFVVDGKAVDIFWDLKAAKFNGETEPTSEYYVAVVCDEEIVLLLGDLKNDAYKRTGCRPALIDPILVSKKEHIFGKKKFSTRAKFLEKGRCHEISIECKNKGNGGSTRNSDLVNGVQPEMEIRIDGDLVIHVKHLQWKFRGNESIHLNKMRVEVYWDVHDWLFSPGLKHALFIFKPIISSTSLASPPLSSSSSTPLSAHTGSSGSAEGFSVRGSSDFCLFLYAWKVE 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1345 347 PANTHER EXPRESSED PROTEIN 37 345 IPR008586 -
Glsi13g1345 347 Pfam Plant protein of unknown function (DUF868) 56 345 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1345 Glsi-ChrGlsi13 30760729 30762121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1345 37 347 EF-hand Containing Proteins AT5G28150 38.608 7.61e-68 213
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0633 02 4149321 4150289 Glsi13g1345 13 30760729 30762121 CCT
Glsi13g1345 13 30760729 30762121 Glsi13g1345 13 30760729 30762121 ECH