Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1333 ATGGCCTCAGTTTCGCAAAAAGCGACGCCTCCGTCTTGCTGTTCCTCCGGCGATTCAGCTCCCGTTTCACTACTTGCAGCTCCATCCACTGGTGCTGCTAATGCCGTGCAAGAGTGGACCAATCGCCCCGATGATCATCGCGTCAAGAAGGTAGCTATCGCGACTTTGATTAGCCCTGTCGATTCGCTTCCCGAACCTTCCACTAAAGCTTCTACTACGAAAGGAATCACTGCAATGCCAAGGGCCGTATCAAGCCACCCTTTGGACCCTTTATCTGCTGCTGAGATCTCTGTGGCAGTGGCAACTGTGAGAGCAGCTGGAGCCACACCTGAGCTCAGAGATGCTATGCGCTTTATTGAAGTCGTTCTGGTGGAACCAGATAAGCATGTTGTTGCACTGGCAGATGCATATTTCTTTCCCCCTTTCCAACCATCATTGCTTCCTAAAACTAAAGGAGGGCCTATAATTCCCAGTAAACTTCCTCCAAGATGTGCAAGACTTATTGTTTACAATAAGAAGTCAAACCAGACTAGTTTATGGATTGTTGAACTTTCAGAAGTACATGCAGTAACTCGAGGTGGTCATCACCGGGGAAAAGTAATTTCATCACATGTTATTCCAGATGTTCAGCCTCCAATGGATGCTGTGGAGTATGCAGAATGTGAAGCTGTTGTTAAAGATTTTCCGCCATTTAGAGAGGCTATGAAGAAAAGGGGTATTGAAGACATGGACCTTGTAATGGTTGATGCCTGGTGTGTTGGTTATCACAGTGAAGCTGATGCTCCCAGCCGAAGGCTGGCTAAACCACTTATATTTTGTCGAAGTGAGAGTGACTGCCCAATGGAAAATGGCTATGCACGCCCAGTTGAGGGCATCTATGTGCTTGTTGATATGCAAAACATGGTGGTGATTGAATTTGAAGACCGCAAACTTGTTCCTCTACCTCCTGTTGATCCCTTGAGGAACTATACTTCCGGTGAAACTAGAGGTGGCTCTGATAGAAGTGATGTAAAACCCTTGCAAATCATTCAGCCTGAAGGTCCAAGCTTTCGTGTTAATGGTTATTATGTTGAATGGCAGAAGTGGAATTTTCGTATTGGATTTACCCCCAGAGAAGGTTTGGTTATATATTCTGTTGCATATGTTGATGGTAATCGGGGGCGAAGGCCTGTTGCTCATAGGTTGAGTTTTGTGGAGATGGTTGTGCCCTATGGAGATCCAAATGAACCACATTACAGAAAAAATGCTTTTGATGCTGGGGAAGATGGCTTGGGAAAAAATGCACATTCTCTCAAGAAGGGATGTGATTGTTTGGGCTACATTAAATATTTTGATGCCCACTTCACCAATTTCACTGGAGGAGTGGAGACAATTGAAAATTGCGTCTGTTTGCATGAAGAAGATCACGGAATCTTATGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTCCGAAGGTCAAGAAGACTTTCAGTTTCTTTTATATGTACTGTGGCTAACTATGAGTATGGATTTTTTTGGCACTTTTATCAGGATGGAAAAATTGAAGCTGAGGTCAAGCTAACTGGAATTCTCAGTTTAGGGGCCTTGCTACCTGGAGAGTCTCGAAAATATGGTACCATGATTGCGCCAGGTCTATATGCTCCTGTCCATCAACACTTTTTTGTTGCTCGTATGGACATGGCTGTTGATTCTAAACCTGGTGAAGCTTTGAATCAGGTTGTGGAGGTCAATGTCAAAGTTGAGGAACCTGGGGAGAATAATGTTCACAATAATGCATTCTATGCTGAAGAGACTCTGCTCAAATCTGAATTGGAAGCCATGCGAGATTGCAATCCGTTGACTGCTCGACATTGGATTGTGAGGAACACAAGAACAGGCAATAGAACTGGACAATTAACAGGCTACAAGCTAGTACCTGGCTCAAACTGCTTGCCTTTAGCAGGTTCTGAGGCCAAATTTCTAAGAAGGGCTGCTTTCTTGAAGCATAATCTTTGGGTCACATCATATTCACGCGGAGAGATGTTTCCCGGAGGAGAATTTCCTAATCAAAACCCCCGTATAGGTGAAGGACTAGCTACATGGGTGAAGCAGAATCGATCTTTGGAAGAAACTGATATAGTTCTATGGTATGTATTTGGAATCACTCATGTCCCTCGGCTAGAAGACTGGCCTGTTATGCCAGTAGAGCGCATTGGTTTTATGCTCATGCCTCATGGATTCTTCAATTGCTCCCCTGCTGTGGATGTCCCGCCGAATGCATGTGAATTGGATTCTAAAGATAATGAGAGCAAGGACAACGGGGTTTCCAAGCCACTTCAGAGTGGATTGGTGGCAAAGCTCTAG 2349 0.4474 MASVSQKATPPSCCSSGDSAPVSLLAAPSTGAANAVQEWTNRPDDHRVKKVAIATLISPVDSLPEPSTKASTTKGITAMPRAVSSHPLDPLSAAEISVAVATVRAAGATPELRDAMRFIEVVLVEPDKHVVALADAYFFPPFQPSLLPKTKGGPIIPSKLPPRCARLIVYNKKSNQTSLWIVELSEVHAVTRGGHHRGKVISSHVIPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDAWCVGYHSEADAPSRRLAKPLIFCRSESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPLPPVDPLRNYTSGETRGGSDRSDVKPLQIIQPEGPSFRVNGYYVEWQKWNFRIGFTPREGLVIYSVAYVDGNRGRRPVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYGFFWHFYQDGKIEAEVKLTGILSLGALLPGESRKYGTMIAPGLYAPVHQHFFVARMDMAVDSKPGEALNQVVEVNVKVEEPGENNVHNNAFYAEETLLKSELEAMRDCNPLTARHWIVRNTRTGNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNLWVTSYSRGEMFPGGEFPNQNPRIGEGLATWVKQNRSLEETDIVLWYVFGITHVPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPPNACELDSKDNESKDNGVSKPLQSGLVAKL 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1333 782 FunFam Amine oxidase 330 755 - -
Glsi13g1333 782 FunFam Amine oxidase 216 319 - -
Glsi13g1333 782 MobiDBLite consensus disorder prediction 758 782 - -
Glsi13g1333 782 Gene3D - 216 318 - -
Glsi13g1333 782 PANTHER COPPER AMINE OXIDASE 82 764 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Glsi13g1333 782 Pfam Copper amine oxidase, N2 domain 86 185 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Glsi13g1333 782 SUPERFAMILY Amine oxidase catalytic domain 334 753 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Glsi13g1333 782 Pfam Copper amine oxidase, enzyme domain 340 748 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Glsi13g1333 782 Gene3D - 68 213 - -
Glsi13g1333 782 SUPERFAMILY Amine oxidase N-terminal region 210 327 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Glsi13g1333 782 SUPERFAMILY Amine oxidase N-terminal region 84 212 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Glsi13g1333 782 Pfam Copper amine oxidase, N3 domain 211 314 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Glsi13g1333 782 FunFam Amine oxidase 70 213 - -
Glsi13g1333 782 Gene3D Copper amine oxidase, catalytic domain 326 753 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1333 Glsi-ChrGlsi13 30675564 30681993 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g1333 13 30675564 30681993 Glsi13g1333 13 30675564 30681993 ECH