Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1323 ATGAGTGCAGGGGCCGGAACTGCAGCTACTGGACTCATCCCCGGTCCCGGGAATGAGGAAACATGCGTCTTGTATTATGGTCACCGGAAGGACTCCAGAACCTGCACCAAAAATGCCTTAGAACAAATGGGGCTCGTCCAAGGTAATTTACCATCATCCATGAAGCTCGAAGAATCAACTTTCCTTGCCAATGACCACCCAATTCTTACTGAAGTCCCACCAAATATAATAGCAACCCCTTCACCCTTTGTTTCTTCAAACAAGGCCAAGAACACCGTCGGTTGCTTCGTGGGCTTCGACGCCGACGAACCCAAAAGCCGGCATGTGGTTCCCATCGGAAAGCTCAGAGGAATCAGGTTCATGAGCATATTCAGGTTCAAACTTTGGTGGAGCACCCATTGGGTTGGAAGTAACGGACGCGATGTGGAGCACGAAACCCAGATGATGATGTTGGAGAACAGTGACTTGGGTCGCCCTTATGTCCTGCTTCTACCGCTCCTTGAAGGACCTTTCAGAGCTTGTCTCCAACCGGGTCTTGACGATGACTACGTGGATATTTGCTTGGAGAGTGGCTCCACGCGTGTCTCAGGGTCCAGCTTCAGAAGCTGCTTGTACATTCATGAGGGCAATGATCCTTATAATTTAATAAAGGAAGCCATGAAAGTGATCAGAGATCATATTGGGACTTTCAGGCTTCTTGAAGAGAAAACCCCACCAGGTATCGTCGACAAGTTTGGATGGTGCACCTGGGATGCGTTTTATCTCAAGGTGCATCCGAAGGGAGTTTGGGAAGGGGTGAGAGGTCTGGCAGAGGGCGGGTGCCCTCCAGGGTTGGTTATAATTGATGATGGTTGGCAAAGCTTTTGTCACGATGACGAACCTGTCACCGATCAAGGAAGCTTGAGTTGCTCATTACCGGGCGAGCAAATGCTAAATAGGCTCACAAGTTTTGAAGAAAATAGTAAGTTTAAGGAGTACTACAGTCGTAGGAGTCCTTCTGATAAAGGCATGGGTGCCCTTGTTAGGGACCTGAAGGAGGAGTTTAAGAGCTTAGAGTATGTGTATGTTTGGCATGCATTTTGTGGGTACTGGGGTGGGATTAGACCCAATGTCCCTGGTATGCCTCAGTCGAAGGTCATTGCTCCAAAGCTGTCAGAAGGTGCGGAGATGACGATGACGGATTTGGCGGTGGTGAAAATAATTGAAATAGGGGTGGGATTGGTAGCTCCAGAAGAGGCTCACAAATTGTACGAGGGACTTCACTCTTACCTGGAATCAGTGGGTGTTGACGGCGTCAAGATTGATGTCATACATCTTCTGGAGATGCTATCAGAGGAATATGGGGGACGTGTTGAACTCTCCAAAGCCTTTTACAAAGCCCTGACTGCTTCTGTGAGGAAGCATTTCAAGGGTAATGGCGTCATCTCTAGCATGCAGCAATGCAACGACTTTATGTTCCTTGGCACTGAAACCATATCACTTGGACGAGTTGGTGATGATTTTTGGTGCACCGACCCTGCGGGAGATCCAAACGGTACTTATTGGCTGCAAGGATGTCACATGGTGCACTGTGCCTATAACAGCTTGTGGATGGGAAATTTTATACACCCAGATTGGGACATGTTCCAGTCTGATCATGCTTGTGCTGAATTCCATGCTGCTTCTCGTGCCATCTCTGGTGGACCTGTTTATGTCAGCGACTCTGTTGGGAAACACAACTTCGAGCTGCTAAAGAAGCTGGTTTTGCCTGATGGTTCCATTCTGCGGTGTCAACATTACGCGCTTCCCACTAGAGACTGCTTGTTTGAAGACCCTTTACACGATGGTAAAACCATGCTCAAAATTTGGAATCTCAACAAATATACAGGGGTTTTGGGTCTGTTTAATTGTCAAGGAGGAGGGTGGTGCCCTAATACTAGGCGAAACAGAAGTGCCTCTGAATTTTCACTCTCTGTGACTTGCTTTGCAAGTCCCAAGGACGTCGAATGGAGCAATGGGAAGAACCCAATATGCACCAAAGGGGTGGATGTATTTGCTGTGTACATGCCTAGGGATGACAAGTTGAAGCTCTTGAAGGTCTCAGAGATTGTAGAGGTTTCGCTGGAGCCCTTTAGTTTTGAGCTTTTCACAATTTCTCCAGTGTTAGTCTTACCTAAATATTCAATCCAATTTGCTCCAATTGGATTGGTGAACATGCTCAACTCGGGTGGCGCAATTCAGAGTTTAGAATTTGAGAAGCTGGAAAATTTGGCGAGAATTGGGGTGAGAGGACAGGGGGAGATGAGGGTATTTGCATTAGAGAAGCCTGTGAGTTGTAAAATTGATGGAGCACCTGTTGAATTTGGTTATGAGGATAACATGGTGAGGGTCCAGGTTCCGTGGCCTAGTTCTTCAAGTTTGTCAGTAGTGGAAACCAACTACAGCACCTCAGCCATGTGCTTCAGCAATGTGGGAGATTACGTGCTCCAATATTGGAGTTCTGGAGTGTTGTGCCCAATAGAGTCAATTCATTTTTCTTCCTCCCCCAACATCCTCAGTTTTGGGGAAATCCCGGAATGGCAATGCATTAGGTTTGTTTTTGTCTGCGTTTGTATGCTGCTAAACCACGATCCATTTAAACTTTCAAAAAAAGATGGGGCTAAAATTATAAGTCCAAATCCCACTGTGCAAGTTTGTGAGGCTTTCGAATTACCACATACAGGTCGATGGGATTCAGAGTCCTTACGAGAATCCCGTAACTTTCCTCCAAAACTTCCCCAAAATTTTCCCTTCAGAGTCCTTACTTCGACTTTGAATTTGCATTAG 2805 0.4674 MSAGAGTAATGLIPGPGNEETCVLYYGHRKDSRTCTKNALEQMGLVQGNLPSSMKLEESTFLANDHPILTEVPPNIIATPSPFVSSNKAKNTVGCFVGFDADEPKSRHVVPIGKLRGIRFMSIFRFKLWWSTHWVGSNGRDVEHETQMMMLENSDLGRPYVLLLPLLEGPFRACLQPGLDDDYVDICLESGSTRVSGSSFRSCLYIHEGNDPYNLIKEAMKVIRDHIGTFRLLEEKTPPGIVDKFGWCTWDAFYLKVHPKGVWEGVRGLAEGGCPPGLVIIDDGWQSFCHDDEPVTDQGSLSCSLPGEQMLNRLTSFEENSKFKEYYSRRSPSDKGMGALVRDLKEEFKSLEYVYVWHAFCGYWGGIRPNVPGMPQSKVIAPKLSEGAEMTMTDLAVVKIIEIGVGLVAPEEAHKLYEGLHSYLESVGVDGVKIDVIHLLEMLSEEYGGRVELSKAFYKALTASVRKHFKGNGVISSMQQCNDFMFLGTETISLGRVGDDFWCTDPAGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSDHACAEFHAASRAISGGPVYVSDSVGKHNFELLKKLVLPDGSILRCQHYALPTRDCLFEDPLHDGKTMLKIWNLNKYTGVLGLFNCQGGGWCPNTRRNRSASEFSLSVTCFASPKDVEWSNGKNPICTKGVDVFAVYMPRDDKLKLLKVSEIVEVSLEPFSFELFTISPVLVLPKYSIQFAPIGLVNMLNSGGAIQSLEFEKLENLARIGVRGQGEMRVFALEKPVSCKIDGAPVEFGYEDNMVRVQVPWPSSSSLSVVETNYSTSAMCFSNVGDYVLQYWSSGVLCPIESIHFSSSPNILSFGEIPEWQCIRFVFVCVCMLLNHDPFKLSKKDGAKIISPNPTVQVCEAFELPHTGRWDSESLRESRNFPPKLPQNFPFRVLTSTLNLH 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1323 934 Pfam Raffinose synthase or seed imbibition protein Sip1 55 790 IPR008811 -
Glsi13g1323 934 SUPERFAMILY (Trans)glycosidases 239 590 IPR017853 -
Glsi13g1323 934 Gene3D Aldolase class I 239 581 IPR013785 -
Glsi13g1323 934 FunFam Probable galactinol--sucrose galactosyltransferase 5 243 583 - -
Glsi13g1323 934 PANTHER - 55 805 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1323 Glsi-ChrGlsi13 30603479 30618437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1323 49 804 Glycoside Hydrolase AT5G40390 62.630 0.0 1020
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g1323 13 30603479 30618437 Glsi13g1323 13 30603479 30618437 ECH