Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1297 ATGCTGAGGCTGGTTTCGAAGAGAATTTTGGGACCAGCGGTGCGGGGGACGCCCTCACCGGTGCTCCGGGTTCTGCCCCGTTTCTACCACGAGAGGGTTGTTGACCACTACAACAACCCACGAAATGTTGGATCCTTCGACAAGAATGACCCCACCGTCGGTACGGGATTGGTTGGGGCACCCGCTTGTGGGGATGTCATGAAACTCCAGATTAAGGTTGATGACAAGACCGGAAAGATTGTTGACGCTCGCTTTAAGACCTTCGGCTGTGGTTCGGCCATTGCCTCTTCGTCTGTCGCTACTGAATGGATTAAGGGAAAGCAAATGGAGGAAGTTGTATCCATTAAAAACACTGAAATTGCAAAGCATCTTTCCCTTCCCCCTGTTAAGCTTCACTGCAGCATGCTTGCTGAGGATGCCATTAAAGCAGCTGTTAAAGACTATGAAGCTAAGCGTGCCAAGGCAACTGCTAGTGAGGAGGCAACATCTGGAGAGAAGGTTGCGACTGCCTGA 513 0.5127 MLRLVSKRILGPAVRGTPSPVLRVLPRFYHERVVDHYNNPRNVGSFDKNDPTVGTGLVGAPACGDVMKLQIKVDDKTGKIVDARFKTFGCGSAIASSSVATEWIKGKQMEEVVSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAKATASEEATSGEKVATA 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1297 170 SUPERFAMILY SufE/NifU 28 153 - -
Glsi13g1297 170 NCBIfam Fe-S cluster assembly scaffold IscU 29 152 IPR011339 GO:0005506|GO:0016226|GO:0051536
Glsi13g1297 170 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 6 160 IPR002871 GO:0005506|GO:0016226|GO:0051536
Glsi13g1297 170 Gene3D - 28 169 - -
Glsi13g1297 170 Pfam NifU-like N terminal domain 29 154 IPR002871 GO:0005506|GO:0016226|GO:0051536
Glsi13g1297 170 CDD IscU_like 29 144 IPR002871 GO:0005506|GO:0016226|GO:0051536
Glsi13g1297 170 FunFam Iron-sulfur cluster assembly protein 29 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1297 Glsi-ChrGlsi13 30392434 30394411 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0700 02 4547381 4549099 Glsi13g1297 13 30392434 30394411 CCT
Glsi13g1297 13 30392434 30394411 Glsi13g1297 13 30392434 30394411 ECH