Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1278 ATGAGGCTTCACTTCATCTTCTTCTTTTTGTCGCTCTCTTCTTTCCATGTTTGTTTAGCAATCACAGGCAAGGAAATTTCTCCAACACATTCCATCAAAACCAACCCATTTACCCCCAGAGCCTCTCTCCTTCGTTATTGGAACACCCACGTCTCTAGCAAGCTCCCAATCCCCCATTTCCTCTTTTCCAAAGCTTCCCCTCTCACCCCTCATGACTACGCCTTCCTCAAAAAGATCGTAGCCCACAAAACCCTCTCTTCACGCTTCGAATCCTTTTGCTCCTTAGCTAACTTGTACTGCGCCTTTGACTCATCGTCACAACCAGCTGATGCAACCAATCGTGCCAACAACGACGCCAACTTCGCCCTCTACTCCAACAAACGATTCACAAACTACGGCTCGTCCCGAGTCGGCGGAGTTGACTTATTTAAGAATTACTCGGATGGGTTAAACACCATCAACGATTCATTCAAAAAGTACAGTCAAGACTCGACCCGCCACAGTGAGCAGTTCAAGAACTACGCAGAAAATGGCAATGTAGCAGATAACAACTTCACAAGTTACGGCTCCAAAGCCACAGGCGGCTCCGGTAACTTCAACAACTACGACAAGCTGGTTAACGTTCCCAATCTCCAATTCACTTCCTATGACTCTGCCGCCGACAATCACCAGCTTTCTTTCTCCAGCTATGGCAACGAAACCAACTCCGGTTCTCAATCGTTCGCAAGTTACAACAAGAATGCTCGTGCGGGACCCAATGATTTCAGCAGCTACGCGGAAAACACCAATATCCTGCAGTCGGACTTCACGGGTTATGGCGAATCAGGTAGTAGATCAAACGACACCTTTAAATTCTATAGTTCCTCAGGTAATAACCCGCGAACCAATTTTAAAACCTACGGTTCCGGGTCCAATTCTGGCACCGATACATTTCTGAGTTACCGGAACCGTGCGAATGTGGGTGAGGATTCCTTTCAGAGTTATGCTGCAAAATCTAATTCGGGTTCGGCGAGCTTCGCTAACTATGGGCAATCGTTCAACGTGGGAAATGATACTTTCAAGGAATACGGTAAAGGATCCGTAGGTCGGACCCCAATCGGATTCAAGTCATATAGTTTGGGTCGGACGTTCAAAGATTACAATAAGCAGGGTGTCTCGTTTTCGGAATACCATAATTTCAGCGGGTTTAGTGGCAAACTCGTGAATAGATGGGTGGAGGCGGGCAAATTTTTCAGGGAATCCATGATGAAGGAGGGCAATGTTATGGTGATGCCCGACATTAGAGACAAGATGCCTCCAAGGTCGTTTATGCCCGGGGCTATTTCATCAAAATTACCGTTCTCCTCCTCATTGCTGGCTGAGATCAAAGAAATGTTTCACGCGCGAGAGGGGTCGGCGATGGAGCGCGTGATAATGAAGGCTTTGGAAGAGTGCGAGAGGGCGCCGAGCCGGGGTGAGACGAAACGGTGCGTAGGGTCGGCGGAAGCCATGATACAGTTCGCTGTGTGGGTGCTGGGTCCCAACGTGGTGGTGAGGAGCACCGAGAACGTGAATGGATCAAGCACGACTGTGATGATTGGAAGAGTGAAGGCGATAAACGGTGGAAAAGTGACGAAATCAGTTTCTTGTCATCAGAGTTTGTACCCGTACCTACTGTATTATTGTCACTCTGTCCCCAACGTGAGAGTATATGAGACTGATATTCTTGACGTAGACACCAAGGTGAAGATCAATCATGGGGTTGCCATTTGTCATCTGGACACGTCATCGTGGGGTCCACAGCATGGGGCCTTCTTGGCACTCGGCTCCAGCCCCGGGAAAATCGAAGTCTGTCACTGGATTTTCGAGAACGACATGACCTGGACCACTGCTGACTAA 1878 0.4856 MRLHFIFFFLSLSSFHVCLAITGKEISPTHSIKTNPFTPRASLLRYWNTHVSSKLPIPHFLFSKASPLTPHDYAFLKKIVAHKTLSSRFESFCSLANLYCAFDSSSQPADATNRANNDANFALYSNKRFTNYGSSRVGGVDLFKNYSDGLNTINDSFKKYSQDSTRHSEQFKNYAENGNVADNNFTSYGSKATGGSGNFNNYDKLVNVPNLQFTSYDSAADNHQLSFSSYGNETNSGSQSFASYNKNARAGPNDFSSYAENTNILQSDFTGYGESGSRSNDTFKFYSSSGNNPRTNFKTYGSGSNSGTDTFLSYRNRANVGEDSFQSYAAKSNSGSASFANYGQSFNVGNDTFKEYGKGSVGRTPIGFKSYSLGRTFKDYNKQGVSFSEYHNFSGFSGKLVNRWVEAGKFFRESMMKEGNVMVMPDIRDKMPPRSFMPGAISSKLPFSSSLLAEIKEMFHAREGSAMERVIMKALEECERAPSRGETKRCVGSAEAMIQFAVWVLGPNVVVRSTENVNGSSTTVMIGRVKAINGGKVTKSVSCHQSLYPYLLYYCHSVPNVRVYETDILDVDTKVKINHGVAICHLDTSSWGPQHGAFLALGSSPGKIEVCHWIFENDMTWTTAD 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1278 625 ProSiteProfiles BURP domain profile. 410 624 IPR004873 -
Glsi13g1278 625 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 17 625 - -
Glsi13g1278 625 Pfam BURP domain 410 622 IPR004873 -
Glsi13g1278 625 SMART BURP_2 408 624 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1278 Glsi-ChrGlsi13 30173716 30175730 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1069 09 7451831 7453084 Glsi13g1278 13 30173716 30175730 ECH
Glsi13g1278 13 30173716 30175730 Glsi13g1278 13 30173716 30175730 ECH