Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1260 ATGGCAGGAGGAGGGGGAGGAGCTCCAGCACCGAAAGCAGATGAGCCACAGCCACACCCTCCAAAGGATCAACTACCAAATATTTCTTATTGCATTACTAGTCCTCCTCCATGGCCTGAGGCCATACTTCTTGGTTTTCAACATTATATTGTGATGCTTGGCACAACTGTGCTCATTCCCACTGCTCTTGTTCCCCAGATGGGAGGTGGCAATGAGGAGAAAGCAAAAGTGATCCAAACAGTACTCTTTGTTGCTGGTATAAACACATTGCTGCAAACTCTGTTTGGAACTCGACTGCCTGCAGTAATTGGAGGGTCTTATACCTTTGTTCCAACCACTATCTCGATTATACTTGCTGGTCGATTTAGTGATGTTGCAGATCCTATAGAGAGATTCAAGAGGATAATGCGCGCAATCCAGGGTGCTCTTATTGTTGCTTCAACTCTTCAAATAGTATTAGGCTTTAGTGGCCTCTGGCGCAATGTTGCAAGGTTCTTAAGTCCACTTTCAGCTGTTCCTTTGGTATCTCTTGTTGGTTTTGGCCTGTACAAGTTAGGTTTTCCTGGGGTTGCTCAATGTGTGGAGATTGGATTGCCGGAGCTTATATTGCTAGTATTTGTTTCACAGTACGTTCCCCATGTGTTACACGCAGGAAAACATATCTTTGAGCGTTTTTCTGTTTTATTTACAATTGCAATTGTGTGGATATATGCTCATATACTCACTGTTGGAGGGGCCTATAACCATGCTGCTCCTAAAACACAAGCAACCTGCCGCACTGATCGTGCTGGACTAATAGATGGTGCTCCATGGATTAGAGTTCCGTATCCCTTTCAATGGGGAGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCTTCCCTTGTTGCTCTTGTAGAGTCCAGTGGAGCTTTTATCGCTGTGTATAGGTATGCAAGTGCAACTCCACTACCACCATCTATTCTCAGTCGGGGTATTGGCTGGCAGGGAATTGCCATTCTTTTATCTGGACTGTGGGGAACTGGCACTGGATCCTCTGTATCTGTAGAAAATGCAGGTCTTTTGGCTTTGACCCGGGTTGGCAGTCGACGAGTTGTGCAAATATCAGCTGGATTTATGATTTTCTTTTCAATTCTTGGAAAATTTGGAGCAGTTTTCGCCTCGATTCCCCCACCAATTGTTGCTGCTTTGTACTGCTTGTTCTTTGCCTATGTGGGTGCGGGAGGTCTTAGTTTTCTTCAGTTCTGCAACCTCAACAGTTTTAGAACAATTTTCATATTAGGCTTCTCTATATTCTTGGGGTTGTCTGTGCCACAGTACTTCAACGAGTACACAGCAATTAATGGTTTTGGTCCAGTCCACACAAATGCAAGATGGTTCAATGATATGGTGAATGTGCCATTCCAATCAGAAGCGTTTGTTGCGGGTTGTGTGGCATATTTCCTGGACAACACAATACATAAGAAAGATGGGGCTATTAGGAAAGACAGAGGGAAACATTGGTGGGACAAGTACCGTTCCTTCAAGGGAGATTCAAGAAGTGAGGAGTTCTATTCACTGCCCTTCAAACTAAACAAATACTTCCCATCTGTGTAA 1605 0.4442 MAGGGGGAPAPKADEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTALVPQMGGGNEEKAKVIQTVLFVAGINTLLQTLFGTRLPAVIGGSYTFVPTTISIILAGRFSDVADPIERFKRIMRAIQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYKLGFPGVAQCVEIGLPELILLVFVSQYVPHVLHAGKHIFERFSVLFTIAIVWIYAHILTVGGAYNHAAPKTQATCRTDRAGLIDGAPWIRVPYPFQWGAPSFDAGEAFAMMMASLVALVESSGAFIAVYRYASATPLPPSILSRGIGWQGIAILLSGLWGTGTGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRTIFILGFSIFLGLSVPQYFNEYTAINGFGPVHTNARWFNDMVNVPFQSEAFVAGCVAYFLDNTIHKKDGAIRKDRGKHWWDKYRSFKGDSRSEEFYSLPFKLNKYFPSV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1260 534 MobiDBLite consensus disorder prediction 1 29 - -
Glsi13g1260 534 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 9 532 - -
Glsi13g1260 534 Pfam Permease family 40 444 IPR006043 GO:0016020|GO:0022857|GO:0055085
Glsi13g1260 534 NCBIfam purine/pyrimidine permease 42 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1260 Glsi-ChrGlsi13 30057176 30062651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1260 10 534 Organic Solute Cotransporters AT5G49990 80.989 0.0 876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0734 02 4781028 4787078 Glsi13g1260 13 30057176 30062651 CCT
Glsi13g1260 13 30057176 30062651 Glsi13g1260 13 30057176 30062651 ECH