Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1232 ATGGCTGGTGGAAGTGGCAGCCCTGGAGAGAGTCTTCTACTGAAAGAAGAACAGATTAACAAGGCATTTGCTCGGGCCTGGAAGGTTCACAAATCAAGGGACGAACTTTACGATTGCAAAAGCAGCCCTTCGGAAGTCATCATTAGCTTTCCAGGATCAGGGTCTGTCAAGGATTGGTTTTCTGGAACACCCTTTGGGGAAACCGAAATAAACCTTGGTCTATTTCCCTCACTGAAAAGTATTGGCAATGATGAAGCTGCATTAGTGAATAAAGCATTTCTGCAGAGATTTGAAGCCGTTGAAGGCAAAAAATCGTTCGTAAATGAGGTAGACGAAGCGATGACAAAACAGAAGCAGATAGTGTTTACAGGGCATTCCTCTGGTGCTGCAGTGGCCATTCTTGCGACGTTATGGGCCTTGGACAGGTACCTAACCCCAAACACCAACAGGATCCCTCCTGTGTGCGTGACTTTTGGGTCTCCCTTAGTTGGTAACCATATATTTTCTCACGCTACGAGGCGAGAAAATTGGTCTGGCTACTTTATGCATTTTGTCATGAAATATGACATGGTGCCGCGACTCTTGCTCTCTCCCCTCTCTTCACTTGAACAAAGATTTGACCCGATTCTTGAATTTTTCAACCCTAAGTCTAGATCTTTCATGAAAGAATCAATTGGAAACCACCCTATCATTTCTGATTTCTTCTTGGCCGTGATGACAAATGTAGCAACCGCTACTAGCCATGCTGCCTGTAAGCTCATGGGCAGCACAAAATCAGTACCAGAAATGCTGGCAAATTTTATTGCTTTAAGCCCTTACAGACCCTTTGGAACCTACTTTTTCTTCACCGGAACTGGAAAGCTGATCGTCGTAAGAAACCCGGATGCTGCTCTGCAACTTTTATTTTTCTCCGCTCAATTAAGCACTGAAGCAGATACTCCTCAAGTTGCCAAATGCCTTCAAGAACATCTCAACTATGGTGAAGAACTAAAAAAAGAAAGTTTAGCAATACAAAATTTGGTTTACTTAGATCAACTTGAGAAGCTTGCTTTGTCTGCCGATGCCTCCGATGGTGATATTGCAGCAACTGACAAGGCCTTGAATGACCTTGGACTTAGCTCAAGAGCTAGATTGTGTCTTGGGGCAGCTGGAGAGTTGGAGAAACAAAAGTCCAGGAACGAGAATAAAATCGATATGAGGAAAGCTTCAACGCATATGAAGGAGCTAGAAGAATACAAAGCAATGAATAAGATTCAGAGAGTGGGTTATTATGATGCCTTCAAGCTGCAAAACTACCGTAGTGACTTCCGCTCGAATGTGAACAGGCTTGAGCTGGCAGGTGTGTGGGATGAGATCATTGAAATGCTAAAAAGGTATGAACTCCCAGATGAATTTGAAGGGAAGGCAGAGTGGGTTGAGATTGGAACAAAGTTTCGACGCCTTGTAGAGCCTCTAGATATTGCTAACTTTTACCGCCATGTAAGGAAGGACCAGTCAGGACCTTACATGGGCGAAAAAGGCAGGCCAAAACGATATAGATACACCCAAAGATGGCTGGAGCATGCCCAAAGAAAGCCGAAAGGAGCTGCCTCTGAATCCTGCTTCTGGGCTGAGGCGGAGGAGCTTTACATCAAAACTGTAAAAAAAACACCATTTGAACATTTCGAGAAAGAGCTTCAGGAACTAGAACAAGAAATCAAAAAATGGATTGACGAAGGTGAACTAACCAAGGAGGATGTCTTCTTAGAGGATTCAACCTTTGTGAAGTGGTGGAAAAACCTACCTCCCCAACACAAGGAAGGGTCCTGCATCAGAAGTTTTATTAACGTTGTTCCCCTAGTAAAGCTAGATATCCCAAGAAATCCAGACGGTGCTCTGAAGCTAATGTTCCATTCAAGTTCGGTTAAACGATTTAGCAGAAGAGTGTTAGTGAAAGAAGAACTCAGAAACATGGCCAGTGAAAGTGGAAGACCTGGAGAGAACATAGTACTAAAAGAAGAACGGATTAAGAAGGCATTTGCTCTGGCGTGGAAGGTAGACAAAGCGATGACAAAACAGAAGCAAATAGTGTTTACAAGGCATTTCTCTGGTGCTGCAGTGACCATTCTTGCAACGCTATGGGCCTTGGACAGGTACCTAACCCCAAACACCAACAGGGTCCCTCCTGTGTGTGTGACTTTTTGGGTCTCCCTTAGTGTGGGTAACCATAAATTGTCTCACGCTCCGAGGCGAGAAAATTGGTCTGGCTACTTTATGCATTTTGTCATGAAATATGACATGGTGCCACGAATCTTGCTTGCTCCCCTCTCTTCACTTGAACAAAACTTTGAACCGATTCTTGAATTTTTCAACCCCAAGTCTAAATCTTTCATGAAAGAATCAATTGGAAACCACCCTATGGCTTCTGATTTCTACGAGGCCGTGATGACAAATGCAGCAACGGCAACAAGCCATACTGCCAGTAAGCTCATGGGCAGCAAAAATGCATTACCAGATATGCTGGCAAATTTTATTGCTTTAAGCCCTTATATACCCTTTGGAACCTACTTTTTCTGCACCGGTAGTGGAAAGCTGATTGTCATAAGAAACCCGGATGCTGCTCTGCAGCTCTTGTTTTTCTCTGCTCAATTAAGCACTGAAGCAGAAACTGCTCAAGTTGCCTACAGATGCCTCCAAGAACATCTCATGTACTGTGATGAACTGAAAGAAAGCTTGGCAATGCAAAATGTGGTTTACTTAGACCTACTTGAGACTTCCTTTGTCTGCAGATGGCTCGGGCGGCGATATTGCATCAGCTAA 2799 0.4394 MAGGSGSPGESLLLKEEQINKAFARAWKVHKSRDELYDCKSSPSEVIISFPGSGSVKDWFSGTPFGETEINLGLFPSLKSIGNDEAALVNKAFLQRFEAVEGKKSFVNEVDEAMTKQKQIVFTGHSSGAAVAILATLWALDRYLTPNTNRIPPVCVTFGSPLVGNHIFSHATRRENWSGYFMHFVMKYDMVPRLLLSPLSSLEQRFDPILEFFNPKSRSFMKESIGNHPIISDFFLAVMTNVATATSHAACKLMGSTKSVPEMLANFIALSPYRPFGTYFFFTGTGKLIVVRNPDAALQLLFFSAQLSTEADTPQVAKCLQEHLNYGEELKKESLAIQNLVYLDQLEKLALSADASDGDIAATDKALNDLGLSSRARLCLGAAGELEKQKSRNENKIDMRKASTHMKELEEYKAMNKIQRVGYYDAFKLQNYRSDFRSNVNRLELAGVWDEIIEMLKRYELPDEFEGKAEWVEIGTKFRRLVEPLDIANFYRHVRKDQSGPYMGEKGRPKRYRYTQRWLEHAQRKPKGAASESCFWAEAEELYIKTVKKTPFEHFEKELQELEQEIKKWIDEGELTKEDVFLEDSTFVKWWKNLPPQHKEGSCIRSFINVVPLVKLDIPRNPDGALKLMFHSSSVKRFSRRVLVKEELRNMASESGRPGENIVLKEERIKKAFALAWKVDKAMTKQKQIVFTRHFSGAAVTILATLWALDRYLTPNTNRVPPVCVTFWVSLSVGNHKLSHAPRRENWSGYFMHFVMKYDMVPRILLAPLSSLEQNFEPILEFFNPKSKSFMKESIGNHPMASDFYEAVMTNAATATSHTASKLMGSKNALPDMLANFIALSPYIPFGTYFFCTGSGKLIVIRNPDAALQLLFFSAQLSTEAETAQVAYRCLQEHLMYCDELKESLAMQNVVYLDLLETSFVCRWLGRRYCIS 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1232 932 Pfam Lipase (class 3) 48 194 IPR002921 GO:0006629
Glsi13g1232 932 Gene3D alpha/beta hydrolase 20 220 IPR029058 -
Glsi13g1232 932 PANTHER PROTEIN EDS1-RELATED 10 609 IPR044214 GO:0006952
Glsi13g1232 932 Coils Coil 552 579 - -
Glsi13g1232 932 Gene3D alpha/beta hydrolase 643 802 IPR029058 -
Glsi13g1232 932 SUPERFAMILY alpha/beta-Hydrolases 41 199 IPR029058 -
Glsi13g1232 932 CDD Lipase_3 42 193 - -
Glsi13g1232 932 Pfam Enhanced disease susceptibility 1 protein EP domain 407 607 IPR041266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1232 Glsi-ChrGlsi13 29725451 29731245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1232 113 195 Acyl Lipid Metabolism Gene Families AT3G07400 37.931 1.04e-09 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g1232 13 29725451 29731245 Glsi13g1232 13 29725451 29731245 ECH