Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1229 ATGTCTCCGTCTTCAGCTCCACCCCAGAACCTCAAACAACGGGTATTCACCTGCCTTACCAAGCTCTCCGACCGTGATACCCAGTCGCTTGCCGCCACTGAGCTTGAGTCCATTGCTCGGAACCTCGATCCAAACTCCGTGCCAGTGTTCCTCTCGTGCATACACTCCACCAATGCGTCAGATAAATCGCCGGTTCGCAAACAATGCGTTCACCTCATGGAGGTGCTCTCTGAAACGCACGGGAATACACTCTCTCCCTATCTTTCCAAAATCCTTGCCCATATAGTTCGTCGGCTCCGTGACCCGGATTCATCAGTTCGATCCGCTTGTGTAAATTCGGTTTCAGCATTGTCCTCCCACATCACCAAACAACCGTTTTCTTCTTTCCTGAAACCGTTAACTGAAGCGCTGTTCACCGAGCAGGACCAAAATTCACAGTCAGGCGCGGCGCTTTGTTTGGTTTCTGCGATTGATGCAGCCCCTGATCTGGACCCAGCGATATTGACGAAGCTCTTACCAAAGTTCGAGAAGTTATTGAAAAGCGAGAGCTTTAAGGCAAAGCCGGCGCTGTTGACTCTTATCGGAAGTGTTATTGAAGCCGGTGGGATTTCGAGTCTTGGGGCTTTGAGAAATTTGGTTCCTTGCATGATGGAATGCTTAAGCAGCAACGATTGGGCGGCAAGGAAGGCTTCGGCCGAGGTATTGATGAAGTTAGCAATAATAGAGAGAGACATGTTACCAGAATTCAAGGCTGGAGGTTTGAAAGTCTTCGAGAACCGACGATTCGATAAGGTAAAGGTAGTTCGGGAAGTTATGAATCAGATGTTTGAGGCGTGGAAGCAGATCCCTGATGTTTCGGATGAATTCTCTCCGCCTCCTAAATCGCAATCTTCTTCCCAAGAAAATATGAGTGATGGGCGCTATCCACCGGTCTCGCAGAATTCATGTAGTCCTGGTTCTGTAATGCCTCGATTGTGGAAGAAATCCATTCCAGTTAGCAGATCAACCCCACCAGATAGTTCTTCTGCTAGCAATGCTAGGAAGACAGGTTCTTCAAGTAGTAACAAGAGAATGAGTTCAGGTGTGGTGCGAAAACTAAACCATAAGAATTGGGATGTTCAAATTTCTGTCCCAAATGCTCCCTCTGCGACAGCTGCTTATCAGGGTTATATTGAAGAGAGAAATGAAACTATTCTGGAAAGAAGCAGAAAGGAGAAAACCAACTGTCTAAAGCCTGAACTGAAACGGGCTATTCTCAGTAAAAATCCTGGTGACAAAATGCGCAAGTTTGGTGGGTCCAAAACTGGATCTCGTGTGGTTCCATGTCATAATGAGAGCCAAGATACAGTTGGTGTTAGTAATGTCACGAAAGATTTCCATAGGAATGATAAAGAAAGTGAGGAGTTAACTTTGATCCGCAGCCAGTTACTTCAAATTGAAAAGCAGCAGTCAAATCTACTTGGTCTTCTGGAGAGATTCATTGGAAGCTCACAAAATGGAATGCGATCTTTAGAGACTCGTGTATATGGCCTTGAGTTGGCATTGGATGAGATCTCTTATGATTTGGCTGCATCAAGTGGAAGGATGACTTATTATGATGCTCCTGGGAATTCATGTTGCTTGCTGCCTGGTGCAGAATTTTTGAGCACCAAATTTTGGAGGAAAACACAGGGACAGTATTCATCCTCCCGGTTCTCTAGATCTGGTGGCACAGGCACCCCATCACTAGCCACTATGAAGTGCAGAGCTGACAGAAAAGGCAATACTGAAACTAGGTTGACAAACCATAAGGTTAGACTTCATGGTGATGGAGGATTCATCACAAATCCGCTGGCAGAAATTCATACCAACTCAGGCGATATGAGACATTGCACGTGA 1878 0.4606 MSPSSAPPQNLKQRVFTCLTKLSDRDTQSLAATELESIARNLDPNSVPVFLSCIHSTNASDKSPVRKQCVHLMEVLSETHGNTLSPYLSKILAHIVRRLRDPDSSVRSACVNSVSALSSHITKQPFSSFLKPLTEALFTEQDQNSQSGAALCLVSAIDAAPDLDPAILTKLLPKFEKLLKSESFKAKPALLTLIGSVIEAGGISSLGALRNLVPCMMECLSSNDWAARKASAEVLMKLAIIERDMLPEFKAGGLKVFENRRFDKVKVVREVMNQMFEAWKQIPDVSDEFSPPPKSQSSSQENMSDGRYPPVSQNSCSPGSVMPRLWKKSIPVSRSTPPDSSSASNARKTGSSSSNKRMSSGVVRKLNHKNWDVQISVPNAPSATAAYQGYIEERNETILERSRKEKTNCLKPELKRAILSKNPGDKMRKFGGSKTGSRVVPCHNESQDTVGVSNVTKDFHRNDKESEELTLIRSQLLQIEKQQSNLLGLLERFIGSSQNGMRSLETRVYGLELALDEISYDLAASSGRMTYYDAPGNSCCLLPGAEFLSTKFWRKTQGQYSSSRFSRSGGTGTPSLATMKCRADRKGNTETRLTNHKVRLHGDGGFITNPLAEIHTNSGDMRHCT 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1229 625 FunFam TORTIFOLIA1-like protein 3 isoform A 2 360 - -
Glsi13g1229 625 Pfam HEAT repeat 91 120 IPR000357 GO:0005515
Glsi13g1229 625 MobiDBLite consensus disorder prediction 284 362 - -
Glsi13g1229 625 MobiDBLite consensus disorder prediction 290 320 - -
Glsi13g1229 625 SUPERFAMILY ARM repeat 9 277 IPR016024 -
Glsi13g1229 625 ProSiteProfiles HEAT repeat profile. 91 129 IPR021133 -
Glsi13g1229 625 MobiDBLite consensus disorder prediction 333 361 - -
Glsi13g1229 625 Gene3D - 4 400 IPR011989 -
Glsi13g1229 625 MobiDBLite consensus disorder prediction 423 445 - -
Glsi13g1229 625 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 9 585 IPR033337 GO:0005874|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1229 Glsi-ChrGlsi13 29708729 29711261 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0762 02 4952383 4954907 Glsi13g1229 13 29708729 29711261 CCT
Glsi13g1229 13 29708729 29711261 Glsi13g1229 13 29708729 29711261 ECH