Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1185 ATGGCAAGTGTTAGAGGTGCCAGACGGGTTGGAGTAAGAACAACCTCACGTACTCCAGTTGTCCAAGAGATAGTACCTAATTCTGGATGGACAGAAGACTCCATGGGCCATTATCTTCTAGTCGATCTTCCTGGTTTCAAGAAGGAGGAGGTGAAGCTTCAAGTTGAGGGCTCTGGCTACATAATTGTACGAGGGGAAAGGCAAGTGGATGAGGAGAAAAGTGTTCATTTTGAGCTGACCTTTCCAGTGCCAAAGGATTCAGATATGGATAAGATAGCTGGGAAATTTGATGGTGAAATCCTCTATGTGACTGTCATCAAGCGAAGTGCACAAGGGAACAAAGAAACTGAGACTGCGAGAGCTGCAAATGGCAGTGTTGGAAGAGCAGAAGAAAGTAAACGCGAGGAACACGAGGCTGATAATGAACGAAGAAATCACAGTCAACAGGACTGCCATAGGAAGGAGGAAATGAGAAATGAAACTTCCCACATTAGGGGTTTTTCTGAAGAGTTGATAAGGAAGTGGGAGAAAGAACCCAGCATTTTAAGAAGTACAGCGGAAATTTTAAGCAAAAACAAGGGAATTGTTATCACTGCTGTGATAGCATTTTCCTTGGGGTTGTTTGTTTCTCGCAAGTTTCAATCCTCAACAGCGGGATAG 660 0.4409 MASVRGARRVGVRTTSRTPVVQEIVPNSGWTEDSMGHYLLVDLPGFKKEEVKLQVEGSGYIIVRGERQVDEEKSVHFELTFPVPKDSDMDKIAGKFDGEILYVTVIKRSAQGNKETETARAANGSVGRAEESKREEHEADNERRNHSQQDCHRKEEMRNETSHIRGFSEELIRKWEKEPSILRSTAEILSKNKGIVITAVIAFSLGLFVSRKFQSSTAG 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1185 219 Coils Coil 129 149 - -
Glsi13g1185 219 MobiDBLite consensus disorder prediction 112 162 - -
Glsi13g1185 219 Coils Coil 217 219 - -
Glsi13g1185 219 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 29 111 IPR031107 -
Glsi13g1185 219 MobiDBLite consensus disorder prediction 127 162 - -
Glsi13g1185 219 SUPERFAMILY HSP20-like chaperones 15 114 IPR008978 -
Glsi13g1185 219 CDD ACD_sHsps-like 30 107 - -
Glsi13g1185 219 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 19 122 IPR002068 -
Glsi13g1185 219 Pfam Hsp20/alpha crystallin family 31 113 IPR002068 -
Glsi13g1185 219 Gene3D - 8 114 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1185 Glsi-ChrGlsi13 29398419 29399210 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g1185 13 29398419 29399210 Glsi13g1185 13 29398419 29399210 ECH