Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1130 ATGGATGGAGAAGCAGAGGCAGTAAGGGAGGACTTTAGAGTGGGGGCATTAGAAATTGGAGGGATGAAGGAAACGGAGATCGACATCTTGCCATGTGCGGGAGAAGATCAGTTGGGTTTGCTGCCCCTCTCCTCTTCTTTCCGACTCCGGTTAATCTCCGGCCCCATTCTTTCCTCAAATTTCATTCGTCCGTCCGATCAAACTCCGGTGGGTGAGAAATTAGGAACAATGAGTCACGTATTCGAAGGGTACGAGCGCCAATACTGTGATCTATCGGCGAATCTTTCTCGGAAATGCACGGCAGCATCTGCCCTTGACGGAGAGCAGAAGAAGCAGAAAGTTTCTGAAATAAAGGCCGGATTAGATGATGCTGATGCATTGATTCGGAAAATGGACCTTGAGGCCAGGAGTTTGCAGCCAAATATAAAGGCGACGCTTCTTGCCAAGTTAAGGGAATATAAAACTGATTTGAATAATTTGAAAAATGAAGTTAAAAGAATCACATCAGCTAATGCCAACCTGGCTGCTCGAGACGAGTTACTGGAGTCAGGAAGTGCTGATGCACTGACGGTATCAAATGATCAAAGAGGAAGACTGTTGATGTCAACTGAGAGATTAAATCAGTCCACTGATAGAGTAAAGGAGAGTAGAAAAACAATGCTGGAAACTGAGGAACTTGGTGTCTCTATCCTCCAAGACCTGCATCAACAACGCCAATCTCTACTGCACGCCCATAATACCATCCATGGAGTAGATGATAACATCAGCAAGAGCAAGAAGGTTTTGGCATTGATGTCGAGAAGAATGAGCAGGAACAAATGGATTGTTGGCTCCTTAGTCACAGCTCTGGTCCTTGCAATTCTATTAATCCTATATTTTAAGCTGACCCATTAA 894 0.4485 MDGEAEAVREDFRVGALEIGGMKETEIDILPCAGEDQLGLLPLSSSFRLRLISGPILSSNFIRPSDQTPVGEKLGTMSHVFEGYERQYCDLSANLSRKCTAASALDGEQKKQKVSEIKAGLDDADALIRKMDLEARSLQPNIKATLLAKLREYKTDLNNLKNEVKRITSANANLAARDELLESGSADALTVSNDQRGRLLMSTERLNQSTDRVKESRKTMLETEELGVSILQDLHQQRQSLLHAHNTIHGVDDNISKSKKVLALMSRRMSRNKWIVGSLVTALVLAILLILYFKLTH 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1130 297 FunFam Vesicle transport through interaction with t-SNAREs homolog 1A 77 175 - -
Glsi13g1130 297 CDD SNARE_Vti1 203 262 - -
Glsi13g1130 297 Gene3D - 75 175 IPR038407 -
Glsi13g1130 297 Gene3D - 193 273 - -
Glsi13g1130 297 Pfam Snare region anchored in the vesicle membrane C-terminus 204 269 - -
Glsi13g1130 297 SUPERFAMILY SNARE fusion complex 206 265 - -
Glsi13g1130 297 Pfam Vesicle transport v-SNARE protein N-terminus 88 166 IPR007705 GO:0006886|GO:0016020
Glsi13g1130 297 SUPERFAMILY t-snare proteins 82 169 IPR010989 GO:0016020|GO:0016192
Glsi13g1130 297 Coils Coil 143 177 - -
Glsi13g1130 297 FunFam Vesicle transport through interaction with t-SNAREsB 193 273 - -
Glsi13g1130 297 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 85 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1130 Glsi-ChrGlsi13 29057913 29062370 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g1130 13 29057913 29062370 Glsi13g1130 13 29057913 29062370 ECH