Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1004 ATGGCACTGGAAAAGGCACCAGATTGTATGTACCTAATGGCATTGTTCCTCGCCTTATTTGCTATCGTTCCAAGCGGCTCTGGCGTTGGAGTTAACTGGGGAACCATGACAACCCACCGGCTTCCACCTGAGAAGGTGGTTAAGATGCTTCAGGAAAATGGGTTTGATAAATTGAAGCTGTTTGATGCGGATGAGTGGATTATGTCAGCTCTGATGGGGACTGATATCGAAGTGATGCTGGCAATACCCAATAACATGCTGGAAGAGATGAGTAAAAACCCTAAGGCTGCAGATTCTTGGGTGCATGAAAATGTGACCAGTTACTTGTATACTGGTGGAGTCAATATCAAGTATGTTGCCGTGGGAAATGAGCCTTTCCTTAAAGCATATAATGGCACCTATCTACATTCAACTCTGCCGGCTCTTAAGAATATACAAACATCACTCAGTAAGGCCGGCCTGGGATTAAAGGTCAAAGTCACTGTTCCCTTCAATGCTGACATATACTATTCCCCGGATTCAAATCCAGTGCCATCAGCTGGTGACTTCAGGCCTGATCTACGAGATCTAACAATTGAAATAATTCAATTCTTATATTCAAACAGTGCACCTTTTACAGTAAATATCTATCCCTTCCTTAGTCTTTATGGCAATGACAATTTCCCTCTTGATTTTGCATTCTTTGAGGGAAGTAACAAGCCTCTTAGAGATGGGAATTCACTTTACACCAATGTGTTCGATGCCAATTTGGATACTCTTCTATGGGCTTTAGACAAGGCAGGGTACCCTGACATGCAGGTCGTAGTTGGAGAAGTTGGCTGGCCAACTGATGGTGATAAGAATGCTAACATCCAGAATGCAAAGAGGTTCAACCAAGGTTTGCTTAGACATGCTCTGAGTGGAAATGGCACCCCTAAAAGGAGAGGCATATTTGACATTTATCTGTTCAGCCTCATCGATGAGAATGCCAAAAGTGTTGCTCCTGGGACCTTTGAAAGGCACTGGGGGATTTTTGAGTTTGATGGGAAGCCAAAGTATGAATTAGACTTAACAGGTCAAGAACAAAATATGGGTCTGGTCCCTGTGGAGGGTGTTAGATATATGGAAAAACAGTGGTGTGTTTTGGACGCAGATGCTACTGACTTGCAAGACTTGGCTAATAGTATTGACTACGCTTGTAGCCTATCTGATTGTACTACCCTGGGCTATGGATCTTCTTGTAATAATCTAAGCCTCCAAGGGAATGCATCCTATGCCTTCAATATGTATTATCAAGTACATAACCAAAGGAATTGGGACTGTGATTTCTCTGGTTTGGCTATCATAACAGATGAGGATCCATCAGAAGAGGGCTGCCAGTTCCCAGTAATGATTTCTAATGGTTCTTCTTTGCTGCTGCAAGGAGGGCTCTTCGATATGCTAAAAAAAGCTGCGGGGGTATTTATTCTGGTTATGTTTTTGCTATAG 1467 0.4294 MALEKAPDCMYLMALFLALFAIVPSGSGVGVNWGTMTTHRLPPEKVVKMLQENGFDKLKLFDADEWIMSALMGTDIEVMLAIPNNMLEEMSKNPKAADSWVHENVTSYLYTGGVNIKYVAVGNEPFLKAYNGTYLHSTLPALKNIQTSLSKAGLGLKVKVTVPFNADIYYSPDSNPVPSAGDFRPDLRDLTIEIIQFLYSNSAPFTVNIYPFLSLYGNDNFPLDFAFFEGSNKPLRDGNSLYTNVFDANLDTLLWALDKAGYPDMQVVVGEVGWPTDGDKNANIQNAKRFNQGLLRHALSGNGTPKRRGIFDIYLFSLIDENAKSVAPGTFERHWGIFEFDGKPKYELDLTGQEQNMGLVPVEGVRYMEKQWCVLDADATDLQDLANSIDYACSLSDCTTLGYGSSCNNLSLQGNASYAFNMYYQVHNQRNWDCDFSGLAIITDEDPSEEGCQFPVMISNGSSLLLQGGLFDMLKKAAGVFILVMFLL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1004 488 FunFam Glucan endo-1,3-beta-glucosidase 5 28 356 - -
Glsi13g1004 488 SUPERFAMILY (Trans)glycosidases 29 349 IPR017853 -
Glsi13g1004 488 Gene3D - 366 460 - -
Glsi13g1004 488 ProSitePatterns Glycosyl hydrolases family 17 signature. 265 278 IPR000490 GO:0004553|GO:0005975
Glsi13g1004 488 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 443 IPR044965 GO:0004553|GO:0005975
Glsi13g1004 488 Pfam Glycosyl hydrolases family 17 29 349 IPR000490 GO:0004553|GO:0005975
Glsi13g1004 488 Pfam X8 domain 371 440 IPR012946 -
Glsi13g1004 488 SMART X8_cls 371 454 IPR012946 -
Glsi13g1004 488 FunFam Glucan endo-1,3-beta-glucosidase 8 367 463 - -
Glsi13g1004 488 Gene3D Glycosidases 28 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1004 Glsi-ChrGlsi13 28150352 28152345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g1004 28 458 Miscellaneous Gene Families AT2G19440 60.093 0.0 540
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g1004 13 28150352 28152345 Glsi13g1004 13 28150352 28152345 ECH