Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0999 ATGAATGCGGTAAGTAGGGACCTCAGGATTCTCTTCCCTTGCCCCCTCATTTTCTCGTCTGATCTGCGTGTAGGGGCCCTGAACTGTTGCGCGTTGCTTGGTTGCCCGGGAATTGAAGTTCTAGAATTCAATATGGTGGCAACTGCAGCTACTTCCTCGTTTTTCCCTGTTACTTCACCCTCACCAGATACTGGTGCAAAGCCTACCAAACTTGGTGGTGGGCCTGCAAACTTAGGAGGACTCAAATCCAAATCTGCATCTTCTCGTGGCTTGCAAGTTAAGGCAAATGCCCAAGCCCCGCCCAAGGTTAATGGAGTTGCTACATCTGTGGAAAGCGTGAAGCATGATAATGATTTGCCATCACCTGCCCCAAGGACTTTTATCAATCAGTTGCCTGACTGGAGCATGCTTCTAGCTGCTATTACAACAATTTTCTTGGCAGCAGAGAAGCAGTGGATGATGCTTGACTGGAAGCCAAAGCGTCCTGACATGCTTATTGACCCCTTTGGTATAGGAAAAATTGTTCAGGATGGTCTTGTGTTCCGGCAGAACTTTTCTATTAGATCATATGAAATAGGTGCTGATAGAACAGCATCTATTGAGACGTTAATGAACCATTTGCAGGAAACTGCGCTTAATCATGTTAAGACTGCTGGGCTTCTTGGCGATGGCTTTGGTTCTACACCAGAGATGTGCAAAAAGAACCTGATATGGGTGGTTACTCGGATGCAGGTTGTGGTTGATCGATATCCTACATGGGGTGATGTTGTCCAAGTAGACACTTGGGTATCTGCATCTGGAAAGAATGGTATGCGTCGTGATTGGCTTGTGTGTGACTGCAAAACTGGTGAAACTTTGACAAGAGCTTCCAGTGTTTGGGTCATGATGAATAAACTGACAAGGAGGCTATCAAAAATACCGGAAGAAGTCAGAGGAGAGATAGGGTCTTATTTTGTGAACTCTGCTCCAGTTGTGGAAGAGGATAACAGAAAACTTCCTAAACTTGACGACAATACAGCAGATTATAAGCTTACTGGTTTAAGTCCTAGATGGAGTGATTTAGATGTCAATCAGCATGTTAACAATGTGAAGTACATTGGCTGGATCTTGGAGAGTGCTCCACAGCCAATTTTGGAGAGCCACGAGCTTTCTGCCATGACTCTGGAGTATAGGAGGGAGTGTGGTAGGGACAGTGTACTTCAGTCCCTGACTGCAGTCTCTGGTGCTGATGTTGGCAGTTTAGCTCTCGGCGGAGGTGTTGAGTGCAAGCATTTGCTCCGGCTTGAAGATGGCGCTGAGATTGTGAAGGGTAGGACCGAGTGGAGGCCCAAAAATCGGGACAACTTGGGCGCCATGAATCAGGTTTCGGCAGAAAGCACCTAA 1383 0.4671 MNAVSRDLRILFPCPLIFSSDLRVGALNCCALLGCPGIEVLEFNMVATAATSSFFPVTSPSPDTGAKPTKLGGGPANLGGLKSKSASSRGLQVKANAQAPPKVNGVATSVESVKHDNDLPSPAPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPKRPDMLIDPFGIGKIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTRMQVVVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVCDCKTGETLTRASSVWVMMNKLTRRLSKIPEEVRGEIGSYFVNSAPVVEEDNRKLPKLDDNTADYKLTGLSPRWSDLDVNQHVNNVKYIGWILESAPQPILESHELSAMTLEYRRECGRDSVLQSLTAVSGADVGSLALGGGVECKHLLRLEDGAEIVKGRTEWRPKNRDNLGAMNQVSAEST 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0999 460 FunFam Acyl-[acyl-carrier-protein] hydrolase 172 447 - -
Glsi13g0999 460 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 346 441 IPR029069 -
Glsi13g0999 460 Pfam Acyl-ACP thioesterase 178 442 IPR002864 GO:0006633|GO:0016790
Glsi13g0999 460 Pfam Acyl-ATP thioesterase 45 167 IPR021113 GO:0016790
Glsi13g0999 460 CDD 4HBT 181 297 - -
Glsi13g0999 460 MobiDBLite consensus disorder prediction 58 79 - -
Glsi13g0999 460 Gene3D Hotdog Thioesterase 171 448 - -
Glsi13g0999 460 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Glsi13g0999 460 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 92 445 IPR045023 GO:0006633|GO:0016297
Glsi13g0999 460 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 175 327 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0999 Glsi-ChrGlsi13 28104951 28113196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0999 45 444 Acyl Lipid Metabolism Gene Families AT1G08510 78.519 0.0 623
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g0999 13 28104951 28113196 Glsi13g0999 13 28104951 28113196 ECH