LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi13g0997	ATGTTAAAGCAAATTCTTAGTAAATTGCCTCGGAAGGTGCTGAAATCTGATCCATCAGATTCGTCACGGAGTGATTCTGGGAATACTTCAAGTTTTGGGAATGTCTTTCAATGTACAAATGTTGGGAGTACCATTTCAAGCAAATTAAATGTTGTGAAGCGGGTTTCTTCAGTGGTCTTCCCAGCAAGTACGAATGCTGGAGTGGAAGCAGTTGACCCCCATCTATCCTTCAAAGATGTTTCAAATACGCAGAAGCAAAACCTGTTTACTAGTAAGTTGAATTTTTGCTGCAAAGTTTATGATATGAGTGATCCTGATAAGAACTCCCCAGAGCAAGATCTTAAACGTCAGACACTCGTAGAGCTTCTTGATTTTGTTACTTCTGGATCTGCAAAGTTCACAGAACCAGCTATTGCTGCAATGTGTAAAATGTGTGCAAGTAATTTGTTCAGGGTTTTCCCACCTAAGTTTCGTACTAGTTCCACTGGAGGGGAAACAGTTGATGAAGAACCAATGTTTGATCCTGCCTGGTCTCACCTGCAAATTGTTTATGACCTACTCCTTCAATTTATCAATTATAACTCTCTTGATGTGAAGGTGGCAAAAATGTACATTGACCATGCTTTCATTTTAAGACTACTTGACCTTTTTGATTCTGAGGACCCTAGAGAAAGAGACTCCTTGAAAGCAATTCTGCATAAAATCTATGGGAAATTCATGGCACACAGGCCCTTTATACGGAAATCAGTTAGCAACATTATCTACCGATTTGTTTTTGAGACTGAACGTCACAATGGAATTGCTGAGCTGTTGGAGATATTTGGGAGTGTAATTAGTGGTTTTGCCTTGCCATTGAAGGAGGAGCACAGAATATTTTTGTGGAGGGTCTTGCTTCCTCTGCACAAACCTAAATCCGTAGGCATTTATCATCAGCAGTTAACATATTGTGTTGTGCAGTTCATAGATAAGGATCCAAAACTGGCTAGCACTGTGATAAAGGGACTATTAAAGTACTGGCCTGTAACAAATAGTCAGAAGAAGTTAATGTTCTTGAGTGAGTTGGAAGAGATTTTGGAAATGACTGGCATGGTGGAATTCCAGAAGATTATGGTCCCACTGTTTCGACGCATAGGTGGTTGTCTTAATAGTTCTCATTACCAGGTTGCTGAACGAGCCCATTTGCTATGGAACAATGAACACATCCTTGATCTGATCACGCAGAACCGGCAGGTGATTCTGCCTCTCATCTTCTCAGCTCTTGTACATAACACCCAAAACCACTGGAATCAAGCTGTGCTCAACCTGACTCAAAACATCAGGAAGATGCTCTCTCAGATGGATGAGGATCTGGTACTTGCCTGCCAACATAATTTGGAGGAGGAAGACTCAAGATCAAGCGCTGCAGCCGAGAGGCGGAGAATAACATGGGAACGTCTGGAAGCTGCTGCCAATGTCCAATCTGTAGTTGGTGACATTTTAGTTCCAGTAAACTCTGCTACATGCTCAGTGGCCTGCTAG	1518	0.4183	MLKQILSKLPRKVLKSDPSDSSRSDSGNTSSFGNVFQCTNVGSTISSKLNVVKRVSSVVFPASTNAGVEAVDPHLSFKDVSNTQKQNLFTSKLNFCCKVYDMSDPDKNSPEQDLKRQTLVELLDFVTSGSAKFTEPAIAAMCKMCASNLFRVFPPKFRTSSTGGETVDEEPMFDPAWSHLQIVYDLLLQFINYNSLDVKVAKMYIDHAFILRLLDLFDSEDPRERDSLKAILHKIYGKFMAHRPFIRKSVSNIIYRFVFETERHNGIAELLEIFGSVISGFALPLKEEHRIFLWRVLLPLHKPKSVGIYHQQLTYCVVQFIDKDPKLASTVIKGLLKYWPVTNSQKKLMFLSELEEILEMTGMVEFQKIMVPLFRRIGGCLNSSHYQVAERAHLLWNNEHILDLITQNRQVILPLIFSALVHNTQNHWNQAVLNLTQNIRKMLSQMDEDLVLACQHNLEEEDSRSSAAAERRRITWERLEAAANVQSVVGDILVPVNSATCSVAC	505

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi13g0997	505	MobiDBLite	consensus disorder prediction	9	29	-	-
	Glsi13g0997	505	Pfam	Protein phosphatase 2A regulatory B subunit (B56 family)	76	483	IPR002554	GO:0000159\|GO:0007165\|GO:0019888
	Glsi13g0997	505	Gene3D	-	82	482	IPR011989	-
	Glsi13g0997	505	FunFam	Serine/threonine protein phosphatase 2A regulatory subunit	81	482	-	-
	Glsi13g0997	505	PANTHER	SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B	1	484	IPR002554	GO:0000159\|GO:0007165\|GO:0019888
	Glsi13g0997	505	SUPERFAMILY	ARM repeat	86	464	IPR016024	-
	Glsi13g0997	505	PIRSF	PP2A_B56	6	496	IPR002554	GO:0000159\|GO:0007165\|GO:0019888

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi13g0997	Glsi-ChrGlsi13	28100284	28102241	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Glsi13g0997	13	28100284	28102241	Glsi13g0997	13	28100284	28102241	ECH