Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0878 ATGTGGGTTCACGAAGAACTTAGGGAGGTGCAACATCGTTCAAGCAGAGCTTTGGGCAATCCTTTCTACAATGGAGCTGGCGTGGAACTTAGGTCTCTCTATCCAAATTCTTTCTGCTTTGTGATGGCGAAATTGAAGATTGCCGGCACATGGGCAGGGGTGCTAGAGGTAGAGCTCGAGACTTGGACGATACCCATGTTGAGGGAAGAAGTCGCTAAGCGATCCAACTGCAGCATCGACTCGATCAATTTGATATGTGCTGGCAAGATTTTGAAAGATGGTGATAGCCGAGAGAATTTGAGGCAACTGGGTCTAAAAAATAACGCCAAAATTCTTGCGAGTCGTGTCCGTGCTGAGGAAGGGAAGTCCTTGATGGCTGAGGAGGAACGCTCTCGCAGACTTGCCCGAGTCAGGGCGGCTGCCACTGCACTAGCCGAAAGGCATGCAGATGGTTCATTACCCGTGGAAGATTTCAACATAGAAGTTGAAGATCAAAGTGGAAAAAAAGTACAGTTAGGTTCTGAGACGGATCAGAGGGCAGTAATGATGGGACTGATGCTTCATGCAAATGGAAAGCGTCTTATTAGACAGAAAAAGTACAATGATGCGTTAGAAGTGCTCTCTATGGGCGAGGAAGCTTTCTCTCTTTGTGATCCGAAGGTCATTGAGCTTATTGACAATGTCCCAATACTGCAAATAGACATGGTGTGGTGCTACTTTATGATCCGTGACATCAGATGGCTATCAGAGGCAGGAAAACGTCTTGAAATGGCTAGGGCAGGAATTGAACGTGCTCATGGGAAGGATTCCCACCGCCTTAGACTACTGCAGGGAAGTCGCTATCCCGAAGTTGCGCTGCGTTTGAGACTAGAGCTGCTTGAAGGAGTGGTGGCTTATCACAGTGGTAAGCTGGATAAATCAAGAAATGCATTGGCTTCTGCAAAAGGAAAATTTGTCCAGCTGCAAGTGCCAGATGAAGCCTTATCACTTGTTATGAGCATGGGCTTTAAAGAACGTGATGCAAAGAGAGCATTATGGATGAACAATCAAGATGTGGGCGGTGCCATTGATTTTCTTGCTGAGGAGAAGGCAAAGAAAATGCAAAAACGGGAGGAAGATATTCATAGAAGAATTGAAATTAGGGAGCAAAAGCGTTATGGGATGACACCCTTAAAGAAAGCTGTGGATCTGCAGAGGTTGAAGGAGTTGGTCTCTATTGGATTTGAGAAGGACCTTGCAGCTGAATCCCTTCGAAGAAATGAAAACGATGCTGAAAAGGCATTGGATGATTTGACAAATCCAGAAACTAACTCTGCTATACAGGTCCATATTGAGACGAGAAAAAGGAAGAGACTGAAGCAAGCAACAGAGTCTCAAATTGAAAATTTTGTTCGCATGGGCTTTGAAAGATCAAGAGTAGTAACTGCTTTCGAGGCAGGAGGCACTTTGGAGCAAATAATGCAAAGACTGACAGCACAACCTGAGGAAGATCCGGCGTTAGCTGCCAACAACATGCAAGTTGAAACAAATTCAACTGCTGCCTCCAACAGCGGAGCAAATTCCTCTGCTCCTTTACCAGACAACATTGGTTCTGATGTCCTAGACCTAGTTGACGATGTTGAAGATCCATCAGATCTTTTAAAAGCAGAAGAGCGAGATGTGGAGATGGAAGATGAGCTTTCTGCAGATATAGCAGAAGCAGATGCCTTGGCTGACTATGATATCGAAGTTAACATAGAAGGGGAAGCCATAACTGAGTACCTGGCTCTGGTGGAGTCGGCGGGCAGCAGCAGTGGGCAAAAGTTGCCTTACCAGTAA 1818 0.4576 MWVHEELREVQHRSSRALGNPFYNGAGVELRSLYPNSFCFVMAKLKIAGTWAGVLEVELETWTIPMLREEVAKRSNCSIDSINLICAGKILKDGDSRENLRQLGLKNNAKILASRVRAEEGKSLMAEEERSRRLARVRAAATALAERHADGSLPVEDFNIEVEDQSGKKVQLGSETDQRAVMMGLMLHANGKRLIRQKKYNDALEVLSMGEEAFSLCDPKVIELIDNVPILQIDMVWCYFMIRDIRWLSEAGKRLEMARAGIERAHGKDSHRLRLLQGSRYPEVALRLRLELLEGVVAYHSGKLDKSRNALASAKGKFVQLQVPDEALSLVMSMGFKERDAKRALWMNNQDVGGAIDFLAEEKAKKMQKREEDIHRRIEIREQKRYGMTPLKKAVDLQRLKELVSIGFEKDLAAESLRRNENDAEKALDDLTNPETNSAIQVHIETRKRKRLKQATESQIENFVRMGFERSRVVTAFEAGGTLEQIMQRLTAQPEEDPALAANNMQVETNSTAASNSGANSSAPLPDNIGSDVLDLVDDVEDPSDLLKAEERDVEMEDELSADIAEADALADYDIEVNIEGEAITEYLALVESAGSSSGQKLPYQ 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0878 605 MobiDBLite consensus disorder prediction 510 530 - -
Glsi13g0878 605 SUPERFAMILY UBA-like 316 362 IPR009060 GO:0005515
Glsi13g0878 605 SMART uba_6 396 433 IPR015940 -
Glsi13g0878 605 SMART uba_6 456 492 IPR015940 -
Glsi13g0878 605 SMART uba_6 324 361 IPR015940 -
Glsi13g0878 605 ProSiteProfiles Ubiquitin domain profile. 63 111 IPR000626 GO:0005515
Glsi13g0878 605 CDD UBA 400 429 - -
Glsi13g0878 605 SUPERFAMILY Ubiquitin-like 60 112 IPR029071 -
Glsi13g0878 605 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 394 434 IPR015940 -
Glsi13g0878 605 Gene3D - 45 119 - -
Glsi13g0878 605 Gene3D - 301 371 - -
Glsi13g0878 605 MobiDBLite consensus disorder prediction 510 527 - -
Glsi13g0878 605 SUPERFAMILY UBA-like 392 435 IPR009060 GO:0005515
Glsi13g0878 605 Gene3D - 372 440 - -
Glsi13g0878 605 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 322 362 IPR015940 -
Glsi13g0878 605 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 43 596 IPR039749 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g0878 13 27177261 27183400 Glsi13g0878 13 27177261 27183400 ECH