Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0624 ATGGTGAAGAGTGGACTTGAAATATGGCGTATTGAGAATTTTAAACCGGTTTCTGTTCCTCAGTCCTCTTATGGCAAGTTTTTCACTGGGGACTCCTATGTGATTTTGAAGACAAGTGGTTCAAAAAGTGGTGCCCTGCGTCATGATATCCATTATTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGTGCTGCAGCTATCAAAACGGTTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGTGAATTACAGGGTCATGAAACTGAAAAGTTCCTCTCCTATTTTAAACCATGTATAATACCTCAAGAAGGTGGAGTTGCCTCTGGTTTTAAACATGCTGAGGCTGATGAACATACGACACGGTTATTTGTATGCAAAGGGAAACATGTTGTTCCTTTCATGCGATCTACACTCAACCATGATGATGTTTTTATTCTGGATACCAAGTCCAAAATCTTTCAATTTAATGGCTCCAATTCATCAATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTACAGTATATGAAGGATACCTACCATGATGGGAAATGTGAGGTTGCTGCTGTTGAGGATGGAAAATTGATGGCTGATTCTGATGCTGGAGAATTCTGGGGTTTATTTGGGGGCTTCGCTCCTCTTCCTCGGAAAACAGCCAGTGATGATGATAAGACTGTTGATTCTCATCCTCCAAAGCTGATGTGTGTTGAGAAGGGGCAGGCAGAAACTATTGAGACCGATTCTTTGACGAGGGAATTACTGGACGTGAATAAATGCTATATTCTTGATTGTGGGTTGGAAGTGTTTGTCTGGATTGGAAGAAACACCTCTCTTGATGAAAGAAAAAGTGCAAGTAGAGCTGCAGATGAGTTAGTAAGAGACCCTGATCGACTGAAATCCCATGTAATTCGTGTAATTGAAGGATTTGAAACGGTTATGTTCAGGTCCAAGTTTGATTCTTGGCCTCAAGCAACTAATGTAACTGTGTCTGAAGATGGTCGTGGCAAGGTAGCAGCACTTCTAAAACGTCAAGGAGTGGATGTCAAAGGTCTGTTGAAGGTTGATCCGGTAAAAGAAGAACCTAAACCCTACATTGATTGCACAGGACATTTGCAGGTTTGGCGGGTGAATGGTCAGGAAAAGATTCTCCTTCAAGCTTCTGATCAGTCAAAATTTTATAGTGGAGATTGCTACATTATTCACTATGCATATCCTGGAGAAGATAGGGAAGAGTATCTTATAGGAATATGGATTGGAAATAATAGTGTTGAGGAAGAAAGAGCTTCAGCAATTTCACTGGCAAGCAAAATGGTTGAGTCAATGAAGTTTCTGCCTTGCCTGGCTCGGATTTATGAAGGGAATGAACCTATTCAATTTCATTCTATACTCCAAAGCTGTATTGTTTTTAAGGGTGGACTTACTGATGGATACAAGAATTATATTACGGAGAAGGAGATTCCAGATGAGACATACAATGTGGATGGTGTTGCACTATTCCGCATCCAGGGCACTGGACCAGACAATATGCAAGCTATACAAGTTGAACCAGTTGCTTCCTCCTTGAATTCGTCTTATTGCTACATACTTCATAATGGGCCCACAGTCTTTACATGGTTTGGAAGCTTTACAAACTCAGATGACCAGGAACTCGTTGAGAGGATGCTGGATTTGATAAAGCCAGAATTACAATCCAAACCACAAAAGGAAGGTTCAGAATCTGAACAGTTTTGGGATTTGTTGGGAGGGAAATCTGAATATCCCACTCAAAAGATTGTAAGGGATGCTGAAAGTGATCCACGCCTATTTTCTTGCAACTCACTGAAAGAAAATTTGAAGGTGACAGAAATATACAACTTTTCCCAAGATGATTTGATGACAGAAGACATTTTCATCTTAGATATTCACTCAGAAATCTTTGTCTGGGTTGGCCAGCAGATTAATCCCAAGAGTAGAATGCAAGCTTTAACAATTGGCGAGAAATTTCTTGAGCATGATTTTTTTCTAGAAAAACTATCTCGTGAAGCTCCAATATATGTTGTCATGGAAGGGAGTGAGCCACCTTTCTTCACTCGCTTCTTCACATGGGAGTCTGCTAAATCTGCGATGCTTGGAAACTCATTTCAAAGGAAGCTTACAATAATGAAAAATGGGGGTACTCCACCTTTGGATAAACCCAAGCGTAGAATACCTGTGTCTTATGGGGGAAGGTCCAGCAGTGTGCCAGAAAAATCTCAGCGTTCCCGCAGTGTGTCTTTTAGTCCCGATCGTGTTCGTGTTAGGGGCAGGTCTCCAGCCTTTAATGCACTGGCAGCTACATTTGAGAGCCCCAAAGATAGGAACCTTTCAACTCCACCTCCCATAATAAGAAAGCTGTATCCAAAATCTATGACACCTGATTCAGCAAAATTTGCACCCAAATCTGCAGCTATAGCAGAAATCAGTTCCAGTTTTGAGTCCTCACGTCCAGCCCGAGAAAGTATTTTACCTCGATCAGTTAAAGTGAGTCCGGAGGTCCCAAAATCAAAGCATGCGTCGAACGATGAAGAGGTTTCTATGAGCGATAGAATAGAATCTCTCACAATAGAGGAAGATGTGAAAGAGGGTGAAGTTGAAGATGATGAAGGTCTCCCAGTTTACCCATATGAACGCCTTAAGATAGGATCTACAGATCCAGTAGCAGACATCGATGTGACTAAGCGAGAGGCTTATCTGTCAGCTGCTGAAGGAAACAAGCAAGTATCTATGAGTAGCGAAAAGTCTCCATCAGTTCCAATTCCGCCATCAACTTCTCCTCCTTCCGTTGAGTTCTGCAAGGGCGCCAATGGCCTCGACAAGGTCCTTCTTCGCGAGGCTCGTGGTAGCTCTGCTGAGGTGTACTTATATGGTGGTCATGTGACTTCTTGGAAGAATGACCATAGGGAGGAATTGCTTTTCCTTAGTAGTAAGGCTACATTTAAACCTCTTAAGGCAATTCGTGGAGGGATTCCATTATGCTTTCCTCAATTTGGAAGCCATGGTACAATTGAGCAGCATGGATTTGCTAGAAACCGGTTCTGGACTGTTGACAATGACCCTCCTCCTTTACCAACAAATACTTCCAATAAAGCTTTTGTTGATTTGATTCTTAAGCCCTCTGAAGAAGACTTGAAGATTTGGCCTCACAGTTTTGAATTCCGTCTTAGGGTAGCTTTGGGACCTGGAGGAGATCTGATGTTGACATCTCGGATTAGGAATACAAACATGGAGGGGAAGCCATTTTCATTCACATTTGCATATCATACATATTTCTCTGTGTCAGACATTAGTGAAGTTCGGGTAGAAGGATTAGAGACACTGGATTATCTTGACAATTTGCAGAACAAGGAGCGTTTTACTGAACAGGGGGATGCTTTAACATTTGAATCTGAAGTGGACAAGATATATCTCAGCACTCCTACAAAGATTGCAGTTCTTGATCATGAGAAAAAGAGAACATTTGTGTTACGTAAAGATGGACTTCCTGATGCTGTGGTGTGGAATCCTTGGGATAAGAAAGCAAAGGCTATGACTGATTTCGGGGATGATGAGTATAAACATATGCTTTGTATAGAAGCTGCTGCTGTTGAGAAACCAATAACTCTGAAACCTGGTGAAGAATGGAAAGGAAGACTTGAGCTTTCAACGGTTCCTTCTAGTTATTGTAGTGGACAGCTTGATCCTCAGCGAGTTCTCCAGGGCTGCTAA 3732 0.421 MVKSGLEIWRIENFKPVSVPQSSYGKFFTGDSYVILKTSGSKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYRELQGHETEKFLSYFKPCIIPQEGGVASGFKHAEADEHTTRLFVCKGKHVVPFMRSTLNHDDVFILDTKSKIFQFNGSNSSIQERAKALEVVQYMKDTYHDGKCEVAAVEDGKLMADSDAGEFWGLFGGFAPLPRKTASDDDKTVDSHPPKLMCVEKGQAETIETDSLTRELLDVNKCYILDCGLEVFVWIGRNTSLDERKSASRAADELVRDPDRLKSHVIRVIEGFETVMFRSKFDSWPQATNVTVSEDGRGKVAALLKRQGVDVKGLLKVDPVKEEPKPYIDCTGHLQVWRVNGQEKILLQASDQSKFYSGDCYIIHYAYPGEDREEYLIGIWIGNNSVEEERASAISLASKMVESMKFLPCLARIYEGNEPIQFHSILQSCIVFKGGLTDGYKNYITEKEIPDETYNVDGVALFRIQGTGPDNMQAIQVEPVASSLNSSYCYILHNGPTVFTWFGSFTNSDDQELVERMLDLIKPELQSKPQKEGSESEQFWDLLGGKSEYPTQKIVRDAESDPRLFSCNSLKENLKVTEIYNFSQDDLMTEDIFILDIHSEIFVWVGQQINPKSRMQALTIGEKFLEHDFFLEKLSREAPIYVVMEGSEPPFFTRFFTWESAKSAMLGNSFQRKLTIMKNGGTPPLDKPKRRIPVSYGGRSSSVPEKSQRSRSVSFSPDRVRVRGRSPAFNALAATFESPKDRNLSTPPPIIRKLYPKSMTPDSAKFAPKSAAIAEISSSFESSRPARESILPRSVKVSPEVPKSKHASNDEEVSMSDRIESLTIEEDVKEGEVEDDEGLPVYPYERLKIGSTDPVADIDVTKREAYLSAAEGNKQVSMSSEKSPSVPIPPSTSPPSVEFCKGANGLDKVLLREARGSSAEVYLYGGHVTSWKNDHREELLFLSSKATFKPLKAIRGGIPLCFPQFGSHGTIEQHGFARNRFWTVDNDPPPLPTNTSNKAFVDLILKPSEEDLKIWPHSFEFRLRVALGPGGDLMLTSRIRNTNMEGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDALTFESEVDKIYLSTPTKIAVLDHEKKRTFVLRKDGLPDAVVWNPWDKKAKAMTDFGDDEYKHMLCIEAAAVEKPITLKPGEEWKGRLELSTVPSSYCSGQLDPQRVLQGC 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0624 1243 PANTHER VILLIN 3 922 IPR007122 GO:0051015
Glsi13g0624 1243 FunFam Villin-like 1 593 714 - -
Glsi13g0624 1243 CDD gelsolin_S1_like 3 109 - -
Glsi13g0624 1243 MobiDBLite consensus disorder prediction 910 937 - -
Glsi13g0624 1243 SUPERFAMILY Actin depolymerizing proteins 491 592 - -
Glsi13g0624 1243 SUPERFAMILY Actin depolymerizing proteins 363 508 - -
Glsi13g0624 1243 SUPERFAMILY Actin depolymerizing proteins 4 132 - -
Glsi13g0624 1243 SUPERFAMILY Actin depolymerizing proteins 114 224 - -
Glsi13g0624 1243 MobiDBLite consensus disorder prediction 740 755 - -
Glsi13g0624 1243 Gene3D Severin 594 713 IPR029006 -
Glsi13g0624 1243 FunFam Villin-like 1 117 227 - -
Glsi13g0624 1243 CDD gelsolin_S6_like 601 698 - -
Glsi13g0624 1243 MobiDBLite consensus disorder prediction 717 759 - -
Glsi13g0624 1243 Gene3D Severin 2 117 IPR029006 -
Glsi13g0624 1243 FunFam Villin-4 365 499 - -
Glsi13g0624 1243 SMART VILL_6 234 324 IPR007122 GO:0051015
Glsi13g0624 1243 SMART VILL_6 372 469 IPR007122 GO:0051015
Glsi13g0624 1243 SMART VILL_6 4 102 IPR007122 GO:0051015
Glsi13g0624 1243 SMART VILL_6 603 699 IPR007122 GO:0051015
Glsi13g0624 1243 SMART VILL_6 122 214 IPR007122 GO:0051015
Glsi13g0624 1243 SMART VILL_6 499 586 IPR007122 GO:0051015
Glsi13g0624 1243 Gene3D Severin 118 227 IPR029006 -
Glsi13g0624 1243 Gene3D Severin 228 337 IPR029006 -
Glsi13g0624 1243 Gene3D Severin 366 500 IPR029006 -
Glsi13g0624 1243 SUPERFAMILY Actin depolymerizing proteins 575 696 - -
Glsi13g0624 1243 CDD gelsolin_S5_like 497 588 - -
Glsi13g0624 1243 CDD D-hex-6-P-epi_like 956 1223 IPR025532 -
Glsi13g0624 1243 Gene3D Severin 501 593 IPR029006 -
Glsi13g0624 1243 PRINTS Gelsolin family signature 303 324 IPR007122 GO:0051015
Glsi13g0624 1243 PRINTS Gelsolin family signature 572 591 IPR007122 GO:0051015
Glsi13g0624 1243 PRINTS Gelsolin family signature 416 434 IPR007122 GO:0051015
Glsi13g0624 1243 PRINTS Gelsolin family signature 653 672 IPR007122 GO:0051015
Glsi13g0624 1243 PRINTS Gelsolin family signature 512 532 IPR007122 GO:0051015
Glsi13g0624 1243 PRINTS Gelsolin family signature 624 646 IPR007122 GO:0051015
Glsi13g0624 1243 PRINTS Gelsolin family signature 391 407 IPR007122 GO:0051015
Glsi13g0624 1243 PRINTS Gelsolin family signature 449 469 IPR007122 GO:0051015
Glsi13g0624 1243 Pfam Aldose 1-epimerase 948 1222 IPR008183 GO:0005975|GO:0016853
Glsi13g0624 1243 MobiDBLite consensus disorder prediction 817 855 - -
Glsi13g0624 1243 MobiDBLite consensus disorder prediction 839 855 - -
Glsi13g0624 1243 FunFam Villin-4 228 334 - -
Glsi13g0624 1243 CDD gelsolin_S3_like 234 323 - -
Glsi13g0624 1243 FunFam Glucose-6-phosphate 1-epimerase 944 1229 - -
Glsi13g0624 1243 SUPERFAMILY VHP, Villin headpiece domain 867 921 IPR036886 GO:0003779|GO:0007010
Glsi13g0624 1243 CDD gelsolin_S4_like 366 465 - -
Glsi13g0624 1243 MobiDBLite consensus disorder prediction 912 926 - -
Glsi13g0624 1243 FunFam Gelsolin 500 592 - -
Glsi13g0624 1243 Pfam Gelsolin repeat 134 197 IPR007123 -
Glsi13g0624 1243 Pfam Gelsolin repeat 14 96 IPR007123 -
Glsi13g0624 1243 Pfam Gelsolin repeat 250 313 IPR007123 -
Glsi13g0624 1243 Pfam Gelsolin repeat 618 692 IPR007123 -
Glsi13g0624 1243 Gene3D - 944 1229 IPR014718 GO:0030246
Glsi13g0624 1243 SUPERFAMILY Galactose mutarotase-like 943 1222 IPR011013 GO:0003824|GO:0005975|GO:0030246
Glsi13g0624 1243 FunFam Gelsolin 1 116 - -
Glsi13g0624 1243 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 235 406 IPR036180 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0624 Glsi-ChrGlsi13 24925311 24944378 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g1497 02 13932449 13938176 Glsi13g0624 13 24925311 24944378 CCT