Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0592 ATGCGCTCAGGAGCTTGTGCATTACAGCAGACCCTCACAGCTGAGGCTGCTTCAGTCTTGAAGCACTCTCTGGGGTTGGCACGGAGGAGGGGCCATGCACAGGTCACTCCTCTGCATGTGGCAGCAACCTTGCTTAGCCTAAGAGCCAGTTCCTTGAGAAGGGCTTGTCTCAAATCTCAGCCACACCATCAAACTTCACATCCTCTTCAATGCAGAGCTCTTGAGCTCTGCTTCAATGTGGCTCTGAATAGGCTTCCAACAACGCCGGGTCCTTTGCTGCACACCCAGACTTCTCTTTCCAACGCTCTCGTCGCTGCATTGAAAAGAGCTCAGGCTCACCAGAGAAGGGGATGCATAGAACAACAGCAACAACAGCCACTTTTAACCATAAAGGTAGAGCTTGAACAGCTTATTATATCTATTCTAGATGACCCTAGCGTTAGCAGGGTTATGAGAGAGGCTGGGTTCTCTAGTACTGCTGTGAAGAGCAACATAGAGGACTCTTCACCCCCTTCTGTTTTTCAGTGTTACAACAGTTCTGGGGGTGTCTTTTCTTCTCCTTGTTCACCTTCTCCTAGTGAAAACCAGAGGGAAACCATCAACCATAGCAATTTCAGGCAGACCAATTTCTTGGCTGCTTACACTTCTGAGTACAACCCAGTTGTTTTTTCTCCTCAAAAGAGAGCTACCCCAGTGTATCCCATCACTGACTCAGGCTCATCTAATGAAGATATAAAGTTGATTTTGGATATCCTCTTGAGGAAGAAGAAGAAGAACACCGTGATAGTTGGAGACTCAGCTGCTATAACTGAGGGCCTTGTGGGAGAGCTGATGGGAAGGCTAGACAAAGGAGAGGTCCCTGATGAGTTGAAGTCAACCCATTTTATCAAATTCCAAGTTGCACCAGTTTCTTTGAGGTTTATGAAAAGAGATGAAGTTGAAATGAACCTCTCGGAGCTGAAAAGGAAGGTGGATTCTATTGCATCAGGAGGAGGAGGGGGTTCCATTTTTTACATAGGAGACCTGAAATGGACAGTGGAGGCAACTACTTTCAGTGAAAAAGAGGGAGGAGGTTCTGTGGATGGAGAAGCCTCTGGTTACAACCCAGTTGATCATCTAGTTTCGGAAATAGGAAAGCTATTCTCCGACTTTGGAAACTCATCAAACGCTAAGGTATGGCTTATGGCCACTGCAAGTTACCAAACATACATGAGGTGTCAAATGAGGCAGCCCCCTCTTGAAACCCAGTGGTCTCTTCAGGCAGTTCTTGTTCCATCAGGTGGACTTGGCTTGAGTCTCCATGCTTCCAGTGTCCTTGATTCAAAGATGAGCATCTCCCAGAATCCATCTCAGATGCTGGAAAAGAAGCTCTTAAATGACTGGGAGGAGCAGGATAAGCTCACTTGCTGTGAAGAATGCGCCTCTAACTATGAAAAAGAAGCTCAATTGTTCAAACCAGGCCAAACCAAACTATTGCCTTCCTGGCTTCAGTCTCATAGCATAGAAGCCCATCAGAAGGAGGAACTAACCCAGTTGAGAAGGAAATGGAATAGATTATGCCACTATGTCCACCAAAGCAAGCATTCTCCAAGCCAATGGAGCAACAGTTTATACAGCAATCACAGTTCAAATGCAAAGATCTACCCTTATAATTCATCATATTCCTTGTGGTCAAAGCAAGGTGGTATCTTCCCAGATTCAAGTTCTATATCATTTGCAGACTCTGCCATTAAACCCACTCATAGTTCCAATCTTGTACCTCGATTCCGACGCCAACAATCATGCAGCACCATTGAGTTCAATTTCAGCAATGGAACTAAAAAACAGCAAGCAATAGAGCCAAGCTTGGATTCTCTCAAAGGCATGGACGGTAAAGAAGTGAAGATCACTCTTGCTCTTGGAAATTTCCCATTCGGAGATTCAGAGCAAAGGGAGGAAAATATAACTGATAGAACACAGCGAAGAGCTCATGTTTGCAAACTATTGCAGGAGAATGTGCCATGGCAATCTGAAACAGTTCCTTCCATAGCAGAGGCCTTGATTGATTCCAAATCAGAAAAGCAAAACAACACTTGGTTAATTTTGCAGGGCAATGAATCTATAGGAAAAAGAAGGTTAGCACACGCAATTGCAGAATCATTTTTTGGTTCAGCCGATCTGCTCTTTCACTTGGACATGAGAAAGAAGGAGAATTTAGCAGCCCCATTTTCTGAAATGCTGACCAGAGCATTGAAAGCCCATGAAAAACTAGTCATCTTGATAGAAAATATTGATTCTGCTGATGCCCATTTCAAGAAATTCCTCGCAGATGGATATAAATCAGGAAAGTTTGGAGATTTAAGTAGGACAGAGGAAAAACCGGGCCAAGCAATATTCATAATGACAAACGGTGACTCAACAAGCAAGGAAGAACAGAATCAGATTCAGGACTCAGTAATGAGATTGACATTGCAGGTCAGCGAAGCCAAGCCAAACCTGGAGACACCTAATTTGGGCAGCCAGAAACGCAAGGCTGAATGGGATTTGTTCACCAAGATCAAGAAACCCAGAATCGAAGAGAAGGAAGAGACATTATTGTTGGTTTCAGAACATGGGAACAGAAAGAAAGACTTTTCGAGACAGTCAAGTTTTAACACCCTTGATCTGAACATACGTGCTGATGAAGAATACGACGATGGGGAAGACAAAACAGGGGAAAGCAGCCCAATTTCAAGCGATTTAACGCGAGAAACCATAGCCGATTCCTTAAACCCAAATGTGTATTTTCTCGATTCAATCGAGAAGCGCTTTGAGTTGAACCGGAGCCCAGCTCGGGACAGGGAGATGGAAGAGTTCTTCTCATCAAAGATCAAAGGGTCATTTGAGGAGGTTAGTGGGAAGGTAAATTTCAGTATAGAACAGAGGGTAATAGAGGAAATGGTTAATGGGTGTGGTTCTTTTACTAACAGCTTGTTTGAGAAATGGTTGAAAGACATTTTTCAAAGCAGAATAGAAACAGTTAACTTTGTGGAGAAGGAGAAGGAGGGTATAGGTTTTAGGCTTTGTTGGGGTGGGATTGGTAAAGGTAAAGGTAAAGAAGATAATAGGGTTTTGGATAGTGGGTTCATGAGTTCATCTCTGCCCAAGAATATCCAAGTTAACTACTTCATGGATTGA 3156 0.4385 MRSGACALQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSLRRACLKSQPHHQTSHPLQCRALELCFNVALNRLPTTPGPLLHTQTSLSNALVAALKRAQAHQRRGCIEQQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKSNIEDSSPPSVFQCYNSSGGVFSSPCSPSPSENQRETINHSNFRQTNFLAAYTSEYNPVVFSPQKRATPVYPITDSGSSNEDIKLILDILLRKKKKNTVIVGDSAAITEGLVGELMGRLDKGEVPDELKSTHFIKFQVAPVSLRFMKRDEVEMNLSELKRKVDSIASGGGGGSIFYIGDLKWTVEATTFSEKEGGGSVDGEASGYNPVDHLVSEIGKLFSDFGNSSNAKVWLMATASYQTYMRCQMRQPPLETQWSLQAVLVPSGGLGLSLHASSVLDSKMSISQNPSQMLEKKLLNDWEEQDKLTCCEECASNYEKEAQLFKPGQTKLLPSWLQSHSIEAHQKEELTQLRRKWNRLCHYVHQSKHSPSQWSNSLYSNHSSNAKIYPYNSSYSLWSKQGGIFPDSSSISFADSAIKPTHSSNLVPRFRRQQSCSTIEFNFSNGTKKQQAIEPSLDSLKGMDGKEVKITLALGNFPFGDSEQREENITDRTQRRAHVCKLLQENVPWQSETVPSIAEALIDSKSEKQNNTWLILQGNESIGKRRLAHAIAESFFGSADLLFHLDMRKKENLAAPFSEMLTRALKAHEKLVILIENIDSADAHFKKFLADGYKSGKFGDLSRTEEKPGQAIFIMTNGDSTSKEEQNQIQDSVMRLTLQVSEAKPNLETPNLGSQKRKAEWDLFTKIKKPRIEEKEETLLLVSEHGNRKKDFSRQSSFNTLDLNIRADEEYDDGEDKTGESSPISSDLTRETIADSLNPNVYFLDSIEKRFELNRSPARDREMEEFFSSKIKGSFEEVSGKVNFSIEQRVIEEMVNGCGSFTNSLFEKWLKDIFQSRIETVNFVEKEKEGIGFRLCWGGIGKGKGKEDNRVLDSGFMSSSLPKNIQVNYFMD 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0592 1051 ProSiteProfiles Clp repeat (R) domain profile. 8 171 IPR004176 -
Glsi13g0592 1051 SUPERFAMILY Double Clp-N motif 12 166 IPR036628 -
Glsi13g0592 1051 Pfam Clp amino terminal domain, pathogenicity island component 26 46 IPR004176 -
Glsi13g0592 1051 Pfam Clp amino terminal domain, pathogenicity island component 132 167 IPR004176 -
Glsi13g0592 1051 Gene3D - 9 169 IPR036628 -
Glsi13g0592 1051 Gene3D - 640 838 IPR027417 -
Glsi13g0592 1051 FunFam protein SUPPRESSOR OF MAX2 1 9 170 - -
Glsi13g0592 1051 Gene3D - 235 423 IPR027417 -
Glsi13g0592 1051 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1006 - -
Glsi13g0592 1051 MobiDBLite consensus disorder prediction 886 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0592 Glsi-ChrGlsi13 24531815 24535452 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g0592 13 24531815 24535452 Glsi13g0592 13 24531815 24535452 ECH