Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g0528 ATGCTATTGGTTAATTCCAACCAAGAAGTCCAAACTACGCATTACGCCGTTTTTGTAAGAAACCCTAAAAGTACCCCCCCCCCCCCCAATCCATCCTTATTAGCTTCTCAATTGGATCTGTTTCATCCCCTCAAAGGAAAATCGATCATCGAAACTCATCGCCGAATAGTTGATATGGGTGATAGCAGTTCTCCGCCTGGGTCTCCAAAAGAAAACCCAGATCATGTTGATGGAGACTTGGTTGCCAAGGGGGATGATTCAGTGGAAAATATTGTCAGGAAGTTCCCAGATTCAATTTCTGTTGGCAAGAGACACAAGTTCTGGGAAACACAACCAGTTGGGCAATTCAAGGACGTTGGAGACACACACTTACCTGAAGGCCCAATTGAGCCACCAACACCATTATCTGAAGTCAAACAGGAGCCTTACAATCTTCCAAATGCTTATGAATGGACCACATGTGACATGGACTCTGAAGAAACATGTTTTGAGGTTTATAATTTATTGAAGAATAATTATGTTGAGGATGATGAGAACATGTTTCGGTTCAATTATTCCAAGGAATTTCTAAGGTGGGCATTGCGCCCTCCAGGTTATTACAGGAGTTGGCACATAGGCGTTCGTGCCAAAACTTCAAAGAAGTTAGTTGCTTTCATCACTGGTGTCCCTGCTAGAATCAGGTTTCGTAATGATATCGTGAAAATGGCAGAGATCAATTTCTTATGCGTCCATAAGAAGCTAAGGTCAAAGAGACTTGCACCTGTTATGATCAAGGAAGTCACTCGGAGGGTTCATTTGGAAAATATTTGGCAAGCGGCTTATACAGCTGGAGTCGTTCTTCCAACGCCGATAACAACTTGTCAATATTGGCATAGATCTTTGAACCCAAAGAAGCTTATTGATGTTGGGTTTTCACGGCTTGGTGCTAGGATGACGATGAGCCGCACCATAAAACTTTACAAACTACCTGATTCAACAGTTACTCCCGGATTTAGAAAAATGGAGCTCCGGGATGTCCCAGCTATCACTCGGTTGCTTAGGAACTACTTGAGCCAGTTTGTTGTCGCACCTGATTTTGATGAAGATGATGTTGAGCATTGGCTTCTTCCAACTGAGAATGTGGTGGATAGTTATGTGGTTGAGAGTCCTGAGAACCATGAGATCACAGACTTCTGCAGCTTTTACACACTTCCTTCTTCTATCCTTGGAAATCAGACCTATTCGTCTTTGAAAGCTGCTTATTCATATTATAACATATCCACCAAAACTCCGTTGCTTCAATTGATGAATGATGTGCTAATTGTAGCAAAGCAAAAGGACTTTGACGTTTTCAATGCTTTGGATGTAATGCAGAATGGGAGTTTCCTCAAAGAACTCAAGTTTGGACCAGGAGATGGGCAACTTCACTACTACTTGTACAATTACAGGATTCGTAATGCCTTGAAACCATCTGAACTTGGGCTTGTGCTCTTGTAG 1476 0.4234 MLLVNSNQEVQTTHYAVFVRNPKSTPPPPNPSLLASQLDLFHPLKGKSIIETHRRIVDMGDSSSPPGSPKENPDHVDGDLVAKGDDSVENIVRKFPDSISVGKRHKFWETQPVGQFKDVGDTHLPEGPIEPPTPLSEVKQEPYNLPNAYEWTTCDMDSEETCFEVYNLLKNNYVEDDENMFRFNYSKEFLRWALRPPGYYRSWHIGVRAKTSKKLVAFITGVPARIRFRNDIVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYTAGVVLPTPITTCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPDSTVTPGFRKMELRDVPAITRLLRNYLSQFVVAPDFDEDDVEHWLLPTENVVDSYVVESPENHEITDFCSFYTLPSSILGNQTYSSLKAAYSYYNISTKTPLLQLMNDVLIVAKQKDFDVFNALDVMQNGSFLKELKFGPGDGQLHYYLYNYRIRNALKPSELGLVLL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g0528 491 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 1. 237 245 IPR022678 GO:0004379
Glsi13g0528 491 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 301 479 IPR022677 GO:0004379
Glsi13g0528 491 Gene3D - 100 491 - -
Glsi13g0528 491 PIRSF N-myristl_transf 73 491 IPR000903 GO:0004379|GO:0006499
Glsi13g0528 491 FunFam Glycylpeptide N-tetradecanoyltransferase 97 491 - -
Glsi13g0528 491 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 2. 460 466 IPR022678 GO:0004379
Glsi13g0528 491 PANTHER N-MYRISTOYL TRANSFERASE 102 491 IPR000903 GO:0004379|GO:0006499
Glsi13g0528 491 FunFam Glycylpeptide N-tetradecanoyltransferase 102 273 - -
Glsi13g0528 491 MobiDBLite consensus disorder prediction 58 78 - -
Glsi13g0528 491 Pfam Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain 128 287 IPR022676 GO:0004379
Glsi13g0528 491 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 103 288 IPR016181 -
Glsi13g0528 491 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 289 491 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g0528 Glsi-ChrGlsi13 23933608 23935420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi13g0528 59 491 Acyl Lipid Metabolism Gene Families AT5G57020 82.488 0.0 764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g0528 13 23933608 23935420 Glsi13g0528 13 23933608 23935420 ECH