LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi13g0514	ATGACAGGGTGCATGCAAGATAGGGAGGGCGACAGCAGAGACACGGGTCCAGAGGAAAAGGGTAAAGCATGCAGAGGTGTAACGGAAATAGAAACTGTCATGGGTGTGAAGGAAAAAGAAGTAGAACAGAGAGATGAGAAGGGAAATGACTGGATAGATGCAAAAGGGAGCGAGTATATGGAGGAGCAGGTAGCATCAGGGGTTGACTTTGTAAAGCTGAGCTGCCAGTGCGCAAGCGAAAACTCCAAAGTAAGCAATAAGAAGTCAGAAGATAAGGGTGAGGGGCATATAGGGGACATAAAACCAATGGGCCTAGGCGAAAGGAGTCAAGGTGAGCCAGAAATTACAAAATCCCATAAGAGAAATGAAAGGGAATCCACAGACATAGTGAGCTCAGTGGCAAAAAAAGGAGTTGACCCAACAGAGGAGATAGAAGGTACTGATGCCAGTTTAGAAGGAGCTAGTTATCTTCTGCTCGCGTCTTTAAAGTTTGTCTGTTTTCCTACTTATTTTTCCGTGGTGCTCCTGCTTTCTGACTGCTGTTGCGTCCCTGATTCTGATTTCTATAAATATTCTCGTGGCATTCATTCCAGTGCACTCGAAGAGGGGAAAAAGGTTGTTTTCTGGTTTCGGGTGATGGGGGAAGAAGCGGGGGTTGGTCCGGCTGATGTAGCAAACAGGCTTAATCTTCAAAATGGAAACGAGGATGATCAAAGTCTTGAATTTGACATATACCCTTTGAGTGGCTACTATTTTGGGTCCAGGGATGCCATTCCCTTCAAGGACGAGACCTTGGTTGATCGCGTTCAGAGGATGAAGTCAAACTATGCTGCTCATGGAATACGAACATGTGTGGAAGCTGTCATAGTGGTTGAGTTGTTCAAACATCCACATTTGTTGCTGTTGCAAGTAAGAAATTCCATCTTTAAACTCCCTGGTGGGCGCCTAAGACCAGGTGAATCAGATATTGGTGGATTAAAGCGTAAGCTGGCAAGGAAGCTTTCTGTTAATGAAGACGGGGATGGGACTGAATGGGAGGTGGGTGAATGCCTTGGAATGTGGTGGAAGCCCGACTTTGAAACATTACTGTATCCCTACTTGCCACCTAATGTGAAAAGTCCAAAGGAGTGTACAAAACTCTACCTTGTGAAGCTGCCAGTAAGTCGAAAGTTCATAGTGCCCAAGAATCTAAGGTTGCTTGCAGTCCCACTTTGCCAAGTTCATGAAAATAACAAGACATATGGGACAATTATATCAGGAGTCCCGCAGCTGCTCTCAAAATTCTCTTTCAACATGATCGAATTTTAA	1308	0.4495	MTGCMQDREGDSRDTGPEEKGKACRGVTEIETVMGVKEKEVEQRDEKGNDWIDAKGSEYMEEQVASGVDFVKLSCQCASENSKVSNKKSEDKGEGHIGDIKPMGLGERSQGEPEITKSHKRNERESTDIVSSVAKKGVDPTEEIEGTDASLEGASYLLLASLKFVCFPTYFSVVLLLSDCCCVPDSDFYKYSRGIHSSALEEGKKVVFWFRVMGEEAGVGPADVANRLNLQNGNEDDQSLEFDIYPLSGYYFGSRDAIPFKDETLVDRVQRMKSNYAAHGIRTCVEAVIVVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIGGLKRKLARKLSVNEDGDGTEWEVGECLGMWWKPDFETLLYPYLPPNVKSPKECTKLYLVKLPVSRKFIVPKNLRLLAVPLCQVHENNKTYGTIISGVPQLLSKFSFNMIEF	435

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi13g0514	435	MobiDBLite	consensus disorder prediction	112	130	-	-
	Glsi13g0514	435	MobiDBLite	consensus disorder prediction	83	141	-	-
	Glsi13g0514	435	PANTHER	PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT	237	434	IPR016706	GO:0003729\|GO:0005849\|GO:0006378
	Glsi13g0514	435	MobiDBLite	consensus disorder prediction	7	24	-	-
	Glsi13g0514	435	FunFam	Pre-mRNA cleavage factor Im subunit 2	240	432	-	-
	Glsi13g0514	435	Pfam	Nucleotide hydrolase	242	428	IPR016706	GO:0003729\|GO:0005849\|GO:0006378
	Glsi13g0514	435	Gene3D	Nucleoside Triphosphate Pyrophosphohydrolase	241	432	-	-
	Glsi13g0514	435	MobiDBLite	consensus disorder prediction	84	98	-	-
	Glsi13g0514	435	MobiDBLite	consensus disorder prediction	1	24	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi13g0514	Glsi-ChrGlsi13	23828361	23837369	Dispersed/Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Glsi13g0514	13	23828361	23837369	Glsi13g0514	13	23828361	23837369	ECH