Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2778 ATGCAAAATATCGGGCAGAAACCAGATCCGGGGATCTCCACCGTCCAGTTAACCGTTCAACCCTATTTATACATTCCTCACATCCTTCATTCTCTTTGCTCTGAGCCTCTTCCCTTCTCTTTCTTGAACCTCTCTCGCACACTGAGAGCTACCCTTTCATTTCCCATTTCTCATTTCTCAGTTCTCTCTCTGTGTTCAGCCATGGCTTTGTTAGTTGACAAAACCACCACTGGCCGCGAGTACAAGGTCAAGGATATGTCCCAGGCCGACTTTGGTCGCCTCGAGATCGATCTCGCTGAGGTCGAAATGCCTGGTCTCATATCTTGCCGTACTGAGTTTGGCTCTTCTCAACCCTTCAAGGGTGCCAAAATTACGGGTTCCCTTCACATGACCATCCAAACCGCTGTTCTCATTGAGACCCTCACTGCTCTCGGTGCTGAGGTCCGCTGGTGTTCCTGCAACATCTTCTCCACCCAGGACCACGCCGCCGCCGCTACTGCCCGTGACAGTGCCGCCGTCTTCGCCTGGAAGGGTGAGACCCTTCAGGAGTACTGGTGGTGCACTGAACGCGCCCTTGATTGGGGTACTAGCGGTGGACCTGATCTCATTGTCGATGATGGTGGTGATGCTACCCTCTTGATCCACGAGGGTGTTAAGGCCGAAGAGCTCTACGAAAAGACCGGCCAGTTGCCAGATCCAGCTTCCACCGAAAATGCTGAGTTTCAGATTGTTCTCACCATTATCAGGGATGGGTTGAAGACCGATCCCAAGAGGTACCGCAGGATGAAGGAAAGACTCGTCGGTGTCTCAGAGGAGACCACCACTGGTGTCAAGAGGCTTTACCAGATGCAGGCTAATGGCACGTTGTTGTTCCCTGCTATCAATGTTAACGACTCTGTCACCAAGAGCAAGTTTGATAACATGTACGGTTGCCGTCACTCTCTTCCCGATGGACTGATGAGAGCCACTGATATCATGATTGCTGGGAAGGTTGCTGTTGTATGTGGTTATGGGGATGTTGGCAAGGGTTGTGCTGCTGCCTTGAAGCAGGCTGGAGCTCGTGTGATTGTGACAGAGATTGATCCTATTTGTGCCCTTCAGGCTCTCATGGAAGGTTTACAAGTTCTGACCTTAGAGGATGTTGTCTCTGAGGCTGACATCTTTGTTACCACCACTGGCAACAAGGACATTATCATGGTTTCTGATATGAAGAAAATGAAGAATAATGCCATTGTTTGCAACATTGGTCACTTCGACAATGAAATAGACATGCACGGACTTGAGACATTCCCTGGTGTGAAGCGTATCACCATCAAGCCTCAAACCGACAGATGGGTTTTCCCTGACACTAACTCAGGCGTCATTGTGTTGGCTGAGGGCCGTTTGATGAACTTGGGTTGTGCCACAGGTCACCCTAGTTTTGTGATGTCCTGCTCATTCACCAACCAGGTCATTGCTCAGCTTGAGTTGTGGAAGGAGAAGGCTACTGGCAAGTATGAAAAGAAGGTCTATGTTCTGCCTAAGCACCTTGATGAGAAGGTTGCTGCTCTCCACCTTGGCAAGCTTGGAGCTAAGCTCACCAAGCTTAGCAAAGATCAGGCTGACTACATCAGCGTGCCAATTGAGGGTCCATACAAGCCTGCTCACTACAGGTACTGA 1659 0.5015 MQNIGQKPDPGISTVQLTVQPYLYIPHILHSLCSEPLPFSFLNLSRTLRATLSFPISHFSVLSLCSAMALLVDKTTTGREYKVKDMSQADFGRLEIDLAEVEMPGLISCRTEFGSSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAATARDSAAVFAWKGETLQEYWWCTERALDWGTSGGPDLIVDDGGDATLLIHEGVKAEELYEKTGQLPDPASTENAEFQIVLTIIRDGLKTDPKRYRRMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNMYGCRHSLPDGLMRATDIMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVSDMKKMKNNAIVCNIGHFDNEIDMHGLETFPGVKRITIKPQTDRWVFPDTNSGVIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKATGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPIEGPYKPAHYRY 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2778 552 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 428 552 - -
Glsi12g2778 552 CDD SAHH 90 540 IPR000043 -
Glsi12g2778 552 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 307 470 IPR036291 -
Glsi12g2778 552 Gene3D - 82 552 IPR042172 -
Glsi12g2778 552 Hamap S-inosyl-L-homocysteine hydrolase [ahcY]. 76 544 IPR000043 -
Glsi12g2778 552 Gene3D - 310 471 - -
Glsi12g2778 552 Pfam S-adenosyl-L-homocysteine hydrolase 80 551 IPR000043 -
Glsi12g2778 552 Pfam S-adenosyl-L-homocysteine hydrolase, NAD binding domain 307 470 IPR015878 -
Glsi12g2778 552 SMART AdoHcyase_NAD_2 307 470 IPR015878 -
Glsi12g2778 552 NCBIfam adenosylhomocysteinase 81 544 IPR000043 -
Glsi12g2778 552 ProSitePatterns S-adenosyl-L-homocysteine hydrolase signature 2. 329 346 IPR020082 -
Glsi12g2778 552 PIRSF SAHH 68 552 IPR000043 -
Glsi12g2778 552 PANTHER ADENOSYLHOMOCYSTEINASE 73 552 IPR000043 -
Glsi12g2778 552 FunFam Adenosylhomocysteinase 309 470 - -
Glsi12g2778 552 SMART AdoHcyase_2 80 551 IPR000043 -
Glsi12g2778 552 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 80 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2778 Glsi-ChrGlsi12 41005913 41009760 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2778 12 41005913 41009760 Glsi12g2778 12 41005913 41009760 ECH