Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2699 ATGGTGGTCGCTAAAAGTGGGGTTCTCCTTGTTCTTGCTCTGGTAATGCTGAACCAGCTGGTGGTGAATGGGGATGAGTCTAACGCCAAGACTCTGGTGAAGTATGTCAAGGGGAAAAAGGTTTGCGACAAAGGGTGGGAATGCAGGGGATGGTCCAAGTACTGTTGTAATCTGACTATCACTGATTACTTCCAGACCTATCAGTTTGAGAATCTCTTTTCCAAGCGCAATACTCCTGTGGCACACGCAGTTGGTTTCTGGGACTATCATTCTTTTATCACTGCTGCTGCACTTTTTGAGCCATTGGGCTTCGGCACCACCGGCAACAAGACTACGCAGATGAAGGAGATTGCCGCGTTCCTGGGCCATGTCGGCAGTAAAACTTCTTGTGGTTATGGAGTGGCCACTGGAGGACCTTTGGCCTGGGGTCTTTGTTACAATCATGAGATGAGTCCTAGTCAGTCATACTGTGATGACTATTACAAATACACCTACCCCTGTGCTCCTGGTGCTGAATACTATGGACGCGGTGCCCTGCCTATTTACTGGAACTACAATTATGGTGCTGCTGGAGAAGCTTTGAAGGTAGATCTATTGAGCCATCCAGAATATATAGAGCAGAATGCAACCTTAGCCTTCCAGGCTGCAATTTGGAGGTGGATGACCTCAATCAAAAAGTCACAACCTTCTTCCCACGATGTCTTTGTTGGAAACTGGAAGCCCACCAAGAATGACACTATGGAGAAACGGATTCCTGGTTTTGGCACCACAATGAACATTCTCTATGGCGACAGCGTATGTGGACAAGGTGACATTGACCCAATGAACAATATTATATCCCATTACCTGTATTATCTTGACCTGCTGGGTGTTGGTAGAGAGCAGGCAGGGCCCAATGAATCGGTTACGTGTGCTGAGCAGGTTCCTTTCAATCCATCCTCTCCCACCTCCTCTGCATCGTCTTGA 966 0.4772 MVVAKSGVLLVLALVMLNQLVVNGDESNAKTLVKYVKGKKVCDKGWECRGWSKYCCNLTITDYFQTYQFENLFSKRNTPVAHAVGFWDYHSFITAAALFEPLGFGTTGNKTTQMKEIAAFLGHVGSKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDYYKYTYPCAPGAEYYGRGALPIYWNYNYGAAGEALKVDLLSHPEYIEQNATLAFQAAIWRWMTSIKKSQPSSHDVFVGNWKPTKNDTMEKRIPGFGTTMNILYGDSVCGQGDIDPMNNIISHYLYYLDLLGVGREQAGPNESVTCAEQVPFNPSSPTSSASS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2699 321 CDD chitinase_GH19 68 304 - -
Glsi12g2699 321 SUPERFAMILY Lysozyme-like 60 311 IPR023346 -
Glsi12g2699 321 PIRSF Endochitinase 1 311 IPR016283 GO:0004568|GO:0005975
Glsi12g2699 321 PANTHER CHITINASE-RELATED 11 307 - -
Glsi12g2699 321 Gene3D Endochitinase, domain 2 148 207 - -
Glsi12g2699 321 Pfam Chitinase class I 68 294 IPR000726 GO:0004568|GO:0006032|GO:0016998
Glsi12g2699 321 MobiDBLite consensus disorder prediction 300 321 - -
Glsi12g2699 321 Gene3D - 68 310 - -
Glsi12g2699 321 FunFam Endochitinase (Chitinase) 148 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2699 Glsi-ChrGlsi12 40519114 40521855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2699 1 314 Glycoside Hydrolase AT1G05850 75.949 0.0 518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2699 12 40519114 40521855 Glsi12g2699 12 40519114 40521855 ECH