Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2218 ATGGGTGTGTCAATTGATTCTTCAAAGGGTGGTAATAATGGAGGGCAGGGTTCATGGAGTTCGTTGAGGTTTTTGACTAGGAGGAAGCAGGTGGATTCTGCCCAGAAAGAAACTGAGAGCCAGCTTGCTAAGGAGTTATCTGTTCCTCATCTGATTGCAATTGGTGTGGGTGCGACCATCGGTGCTGGAGTCTACGTCCTTGTTGGAACAGTTGCTCGAGAGCATTCTGGACCGGCGTTGGCCATTTCTTTTCTCATAGCTGGAATAGCAGCTGCTCTTTCAGCTTTTTGCTATGCAGAGCTCGCTAGTCGTTGCCCTTCTGCTGGGAGTGCTTATCACTATTCATACATATGTGTTGGGGAAGGCGTTGCATGGTTGATTGGATGGGCCTTGATACTGGAATATACAATTGGCGGAGCAGCTGTTGCCCGTGGCATATCCCCCAATATGGCTGCCTTTTTTGGAGGTACAGATAGTTTGCCCATTTTTTTAGCCCGTCAGCTTATTCCTGGGACTGATATTGTTGTGGACCCATGTGCTGCAATTATTGTATTTATTATTACTGGACTGCTGTGCGTTGGAATCAAGGAGAGTACAGTGGTACAAGGCATAGTCACATCTGTGAATATATGTGCCTTGATTTTTGTCATAGTAGCTGGTGGTTACTTGGGATTCAAGTCTGGATGGGTTGGATATGAACTTCCTGCAGGTTATTTTCCCTTTGGAGTTGATGGGATGCTTGCGGGTTCTGCAACAGTCTTCTTTGCATATATTGGTTTTGATGCAGTTGCCAGCACTGCTGAAGAGGTGAAAAATCCTCAACGAGATTTGCCACTGGGTATTGGTGCTGCACTGTTTCTTTGTTGTGCATTGTATATGATGGTCTCTATCGTTGTCGTTGGTTTAGTACCTTATTATGCAATCAATCCTGATACTCCCATATCCTCTGCATTTGCTTCCCATGGGATGCAATGGGCAGCTTACATAATAAATGCTGGAGCTTTTACAGCTCTCTGTTCATCATTGATGGGTGGTATACTTCCCCAGCCCCGAATTTTGATGGCTATGGCAAGGGATGGGTTGCTGCCTCCATTTTTTTCAGACATTAATAAGCGCAGCCAGGTTCCTGTTAAGAGCACAATAGCTACTGGCCTTGTAGCTGCAGTGTTGGCATTTGTAATGGATGTCTCTCAACTGGCGGGGATGGTTAGTGTGGGTACACTTCTCGCATTCACCATGGTAGCGATATCTGTATTGATACTAAGATATATCCCTCCAGATGAGGTCCCATTACCACCTTCTCTCCAGGAATCAATTGATACAGTGTCATTGCAGTCCAGTTCAAACAGTGATGGGAGAAATGAAAAAGATGCAAAGGCAAATGTTGGTACTTCTGGGGACACTAAACCTTTAATTGTCGAAGAGGATGTGTCAATCGATTATCCGCTTATTCCTCAACATCTTGCCATCGGCAAATACATAAATGAAAGTAATAGACGGAAAATTGTTGGGTGGATTATAGCATTCACATGCTTAGGGGTGTTTGTGCTCACATATGCAGCTTCAGATTTAAGCCTTCTCAGATCTATTCGTTTTACATTGTGTGGAGTTGGTGGTACTCTTCTTCTGTCTGGTCTTGTCTTCCTAACCTGCATAGATCAAGATGATGCAAGACACAACTTTGGGCACTCTGGAGGTTTCATTTGCCCATTTGTACCACTGCTTCCTACAGCTTGCATTCTCATCAATTCTTACTTACTTATTAATCTTGGAGCTGCTACATGGGCTCGTGTATCTATATGGCTTGCAATAGGATTACTTGTTTACGTATTTTATGGCCGAACCCACAGCTCTCTAAGAGATGCAGTTTATGTACCGGCAAATCAAGTGGATGAAATCTATCGTACCTCCACAAGCTGTCTGGCTTAA 1929 0.4422 MGVSIDSSKGGNNGGQGSWSSLRFLTRRKQVDSAQKETESQLAKELSVPHLIAIGVGATIGAGVYVLVGTVAREHSGPALAISFLIAGIAAALSAFCYAELASRCPSAGSAYHYSYICVGEGVAWLIGWALILEYTIGGAAVARGISPNMAAFFGGTDSLPIFLARQLIPGTDIVVDPCAAIIVFIITGLLCVGIKESTVVQGIVTSVNICALIFVIVAGGYLGFKSGWVGYELPAGYFPFGVDGMLAGSATVFFAYIGFDAVASTAEEVKNPQRDLPLGIGAALFLCCALYMMVSIVVVGLVPYYAINPDTPISSAFASHGMQWAAYIINAGAFTALCSSLMGGILPQPRILMAMARDGLLPPFFSDINKRSQVPVKSTIATGLVAAVLAFVMDVSQLAGMVSVGTLLAFTMVAISVLILRYIPPDEVPLPPSLQESIDTVSLQSSSNSDGRNEKDAKANVGTSGDTKPLIVEEDVSIDYPLIPQHLAIGKYINESNRRKIVGWIIAFTCLGVFVLTYAASDLSLLRSIRFTLCGVGGTLLLSGLVFLTCIDQDDARHNFGHSGGFICPFVPLLPTACILINSYLLINLGAATWARVSIWLAIGLLVYVFYGRTHSSLRDAVYVPANQVDEIYRTSTSCLA 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2218 642 MobiDBLite consensus disorder prediction 1 20 - -
Glsi12g2218 642 PIRSF AA_transporter 21 431 - -
Glsi12g2218 642 PIRSF AA_transporter 489 629 - -
Glsi12g2218 642 FunFam probable cationic amino acid transporter 42 434 - -
Glsi12g2218 642 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 25 618 - -
Glsi12g2218 642 Gene3D Amino acid/polyamine transporter I 42 436 - -
Glsi12g2218 642 MobiDBLite consensus disorder prediction 442 467 - -
Glsi12g2218 642 Pfam C-terminus of AA_permease 567 617 IPR029485 -
Glsi12g2218 642 Pfam Amino acid permease 47 427 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2218 Glsi-ChrGlsi12 36800736 36807124 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2218 22 642 Organic Solute Cotransporters AT5G36940 69.157 0.0 853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2218 12 36800736 36807124 Glsi12g2218 12 36800736 36807124 ECH