Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2217 ATGGTAGTGAAATCGCAAAGCACTGACGGCAATTGTGGCGGTGTTGGAGGAGGAAGATGGTTACGGGGACTTGGAAGTTTGATTAGGAGAAAGCGGGTTGATTCTGCCCATGTAAGGCGAGAGGGTCATCAATTGGCCAGGAAGTTATCTGCTGTTGATCTCGTTGCAATTGGGGTTGGAGCAACCATAGGTGCTGGAGTGTACATTCTTGTTGGAACAGTTGCTAGAGAACATGCAGGACCAGCACTTGCAATATCAATTCTCATTGCGGGAATAGCTGCTGCACTGTCAGCATTTTGTTATGCTGAGCTTGCTTGTCGATGCCCATCTGCTGGGAGTGCTTATCACTATACATACATATGCATTGGAGAAGGGGTTGCTTGGTTGGTTGGTTGGGCCCTGATTCTGGAGTATACAATTGGTGGTTCAGCTGTTGCTCGTGGCATAACCCCAAATCTGGCCTTGTTTTTTGGGGGTGGGGACAATTTGCCTTATTTTTTGGCTCGTCATACCATCCCAGGTCTTGGAATTGTGGTTGACCCCTGTGCAGCTGTATTAATTATTGTTGTTACCCTACTCTTGTGCATTGGAATTAAAGAGAGTTCAACAGCACAAACCATAGTAACAACAGTAAATGTCACTGTCATGCTTTTCATCATTATAGCTGGTGGTTACCAAGGTTTCAAGACTGGATGGGTTGGATATGAACTTCCTAGCGGGTATTTTCCATATGGAGTAAATGGTGTGTTTGCTGGGGCTGCAATTGTTTTCTTTTCATACATCGGTTTTGATTCGGTAACCAGCACAGCTGAGGAGGTGAAAAATCCTCAGCGAGATTTGCCCCTTGGTATAGCAATTGCATTATTTATATGTTGCATGTTGTATATGCTTGTATCAGCAGTTATTGTTGGCTTGGTACCATACTATGCTTTGGATCCTGATACGCCTATCTCCTCAGCATTTTCTAGTTATGGGATGGAATGGGCAGTGTACATAATAACAACCGGAGCAGTCACTGCTCTCTTTGCCAGTTTGTTGGGTTCAATTCTTCCCCAGCCGCGAATCTTTATGGCAATGGCCAGGGATGGTTTGTTGCCCTCTTTCTTCTCAGAAATCAATAGAAGCACCCAGGTCCCTGTGAAGAGCACTATTGTCACTGGTGTCTTAGCAGCTGCTCTAGCTTTCTTTATGGATGTTTCTCAGTTAGCGGGGATGGTTAGTGTGGGAACACTGCTTGCATTCACCACTGTTGCAGTTTCAGTTTTGATACTCAGATATGTTCCCCCTGACGAGGTGCCCATTCCATCTTCGCTTCAAAATTCCATTGACCCAATGTCTTTGCATTTTGGTGGTGACATAGAGGAACATGGGGGTATAAGTCCAGTAGATCCTGCTTGTTATCATGAGAATAGTAGTCAACAATTACATGATGAGCCGGCTACCCTGCTTGGACATCCTTTAATCATAAAAGAAGTAACACAAGACAAGCAGAATGAGAAAACTAGGCGGAAACTGGCTGCATGGAGCATAGGCATTCTATGTATAGGGATTTTTATCCTTGCAAGTGCAGCTTCAGCTGAAGGATGTCCCAGCATTCTGCGCTTCACATTTTGTGGATTGGGTGGATTTCTTCTTTTGTGTAGTACAATTGTGCTGGCCTTCATAGATCAAGATGATGCAAGGCACAACTTTGGACACACAGGAGGTTTTGTTTGCCCATTTGTTCCATTCTTACCGGCTGCCTGCATTCTTATAAACACCTACTTATTAATTGATCTTGGAGCTGCTACGTGGATTCGAGTTTCAGTATGGTTGTTAATAGGAGCATTTATCTATATATTCTATGGCCGCACCCACAGCTCATTGTTAAATGCAATCTATATCCCCTCAGCACACGCCAATGAGATTCAGCGGACTCAAGCAGATCATCTAGCCTAG 1938 0.4443 MVVKSQSTDGNCGGVGGGRWLRGLGSLIRRKRVDSAHVRREGHQLARKLSAVDLVAIGVGATIGAGVYILVGTVAREHAGPALAISILIAGIAAALSAFCYAELACRCPSAGSAYHYTYICIGEGVAWLVGWALILEYTIGGSAVARGITPNLALFFGGGDNLPYFLARHTIPGLGIVVDPCAAVLIIVVTLLLCIGIKESSTAQTIVTTVNVTVMLFIIIAGGYQGFKTGWVGYELPSGYFPYGVNGVFAGAAIVFFSYIGFDSVTSTAEEVKNPQRDLPLGIAIALFICCMLYMLVSAVIVGLVPYYALDPDTPISSAFSSYGMEWAVYIITTGAVTALFASLLGSILPQPRIFMAMARDGLLPSFFSEINRSTQVPVKSTIVTGVLAAALAFFMDVSQLAGMVSVGTLLAFTTVAVSVLILRYVPPDEVPIPSSLQNSIDPMSLHFGGDIEEHGGISPVDPACYHENSSQQLHDEPATLLGHPLIIKEVTQDKQNEKTRRKLAAWSIGILCIGIFILASAASAEGCPSILRFTFCGLGGFLLLCSTIVLAFIDQDDARHNFGHTGGFVCPFVPFLPAACILINTYLLIDLGAATWIRVSVWLLIGAFIYIFYGRTHSSLLNAIYIPSAHANEIQRTQADHLA 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2217 645 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 28 621 - -
Glsi12g2217 645 Gene3D Amino acid/polyamine transporter I 45 441 - -
Glsi12g2217 645 FunFam probable cationic amino acid transporter 45 438 - -
Glsi12g2217 645 Pfam Amino acid permease 49 431 IPR002293 GO:0016020|GO:0022857|GO:0055085
Glsi12g2217 645 Pfam C-terminus of AA_permease 570 620 IPR029485 -
Glsi12g2217 645 PIRSF AA_transporter 495 626 - -
Glsi12g2217 645 PIRSF AA_transporter 28 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2217 Glsi-ChrGlsi12 36790109 36796395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2217 24 645 Organic Solute Cotransporters AT3G03720 67.949 0.0 847
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2217 12 36790109 36796395 Glsi12g2217 12 36790109 36796395 ECH