Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2212 ATGAAGGGAGATATGGGAGGTGTGTCAGTGGAAATGGAGGGGGGTTTGGTGCAGCAGGGAAGAGACAGAGTAGCGCATGTTAACAAGGTTGGGTATGGGAGAAGAGTCATCACCAAGAAGAGGAAGTCTTGCCGCAGGATTAGGCGCCCCACGACTCCAAAGGCACTTCAGGAGCTGCACGTTTCGTGCCGAGAAACATTTAAAGGCCCTGGCACCGTTCCTTTTTCTCAGCATGTTCAGAAACTTGGCCATATTCTTGATAACTTGAAGCCAGAAGATGTTGGGCTAAGTAGTGATCTGCAATTCTTCAAGCCCGGAAATGTGGTCGAAGAGAATCCAAGGGTCACGTACACGACCATTTACGAGTGTGATAACTTCTCGCTGTACATCTTTTTCCTACCTGCAAATGGAGTGATTCCCCTCCATAACCACCCGGGAATGACTGTTTTCAGCAAGCTTCTACTTGGACAAATGCACATTAAATCTTACGATTGGGTTGATCCCGAGCCTTGTCACAATATGGTGAGATTGGCGAGGATAAAAGCTGACAGCGTCTTCACTGCACCCTGTGATACTACCGTCTTGTATCCCACCACAGGAGGCAACATTCATGAATTGACAGCCATAACTCCATGCGCCGTTCTTGACGTGCTTGGCCCTCCTTATTCTAAACAAGATGGCCGCGATTGCTCCTACTACATACCTCACCCCTACACTGCTTTTCCAACAAATGTTGAGAGTACTGTGATGAAAGAGGAAAATGAGATTTATGGATGGTTGGAAGAAATTGAGATGCCTGAGAACTCTCAAATGGATGGAATTGAATACTTGGTTTTGAGTGTTGATTTGATTCGTTTAAGGTTTAAGTTCCAAGTTCCGATAACAAGACGACCAATATCTTCATTGATCTCCTCCTTGTTGCAGACCCTTTCTTCATCCCAGGATGGGCCTAGAGAGGTTAAGTCCGAAATGAAAGAGCAACAACAGTTGGTAAGAGAGAAAGAAAGGCGCCAAAAGCAACAGATACAAAATGAGGGGCCATGCCAAAAAGAGAAGCTAGAGAAAGCAAAGGCTCACCGATCCCAGACAGCGAAAGTTTACGTTTACAGTACCAGACTCTCGGCTAAAGTCACCTTCGGTACATTTCCTTCAAAATCGTGA 1161 0.4591 MKGDMGGVSVEMEGGLVQQGRDRVAHVNKVGYGRRVITKKRKSCRRIRRPTTPKALQELHVSCRETFKGPGTVPFSQHVQKLGHILDNLKPEDVGLSSDLQFFKPGNVVEENPRVTYTTIYECDNFSLYIFFLPANGVIPLHNHPGMTVFSKLLLGQMHIKSYDWVDPEPCHNMVRLARIKADSVFTAPCDTTVLYPTTGGNIHELTAITPCAVLDVLGPPYSKQDGRDCSYYIPHPYTAFPTNVESTVMKEENEIYGWLEEIEMPENSQMDGIEYLVLSVDLIRLRFKFQVPITRRPISSLISSLLQTLSSSQDGPREVKSEMKEQQQLVREKERRQKQQIQNEGPCQKEKLEKAKAHRSQTAKVYVYSTRLSAKVTFGTFPSKS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2212 386 Coils Coil 324 345 - -
Glsi12g2212 386 PANTHER UNCHARACTERIZED 56 276 IPR012864 GO:0016702
Glsi12g2212 386 CDD cupin_ADO 124 223 - -
Glsi12g2212 386 SUPERFAMILY RmlC-like cupins 52 242 IPR011051 -
Glsi12g2212 386 Gene3D Jelly Rolls 50 255 IPR014710 -
Glsi12g2212 386 Pfam PCO_ADO 85 276 IPR012864 GO:0016702
Glsi12g2212 386 MobiDBLite consensus disorder prediction 329 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2212 Glsi-ChrGlsi12 36763004 36768498 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2212 12 36763004 36768498 Glsi12g2212 12 36763004 36768498 ECH