Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2202 ATGGGCCAACAACTGAACATGTTGTTGTGTTTTCATGGACCACCAATCGGCGTCGTAAAGCAAAGTGGTTTAACACTTGGCAACCTCAAGGCAGGTGAAAAGATAAGGCCACTCCGTTTTGCTTGCGCTGTGCTCTCTGCTTCAATCTCTCCTATCTTAGAAGCGAGAACTGGTCTCTATACAACCGTAAGAACAATGGCATCCCATATTGTTGGATATCCTCGCATGGGCCCCAAGAGAGAGCTTAAGTTCGCTCTGGAGTCATTCTGGGATGGAAAGAGCAGTGCCGAGGACTTGAAAAAGGTGGCTGCTGACCTCAGGTCATCAATCTGGAAGCAGATGGCTGATGCTGGGATCAAGTACATCCCCAGCAACACATTTTCTTACTATGATCAGGTGCTCGATGCTACCGCCTTGCTTGGTGCTGTTCCATCTAGATACGGTTGGACTGGTGGGGAGATTGGATTCGACACCTACTTCTCCATGGCCAGAGGTAATGCATCAGTTCCTGCAATGGAGATGACCAAGTGGTTTGACACCAACTACCACTTTATTGTCCCCGAACTGGGACCTGATGTAAACTTCTCTTATTCTTCTCACAAGGCAGTGGACGAGTACAAGGAGGCCAAAGCGCTTGGAGTAGATACCGTTCCAGTCCTGGTTGGCCCTGTGTCATACTTGTTGCTCTCCAAACCTGCCAAGGGTGTTGAGAAAACATTTTCTCTTCTCTCTCTCCTCCCAAAAATCCTTGCTATTTACAAGGAAGTTGTGGCTGATCTTAAGGCAGCTGGTGCTTCATGGATCCAGTTTGATGAACCAACCCTTGTTTTGGACCTTGACTCTCACAAGCTGCAAGCATTTACTGAAGCTTACTCAGAACTTGAGTCTTCTTTATCTGGCTTGAATGTTCTTATTGAGACTTACTTTGCTGACGTTCCTGCTGATGCTTACAAGACACTCACTGCTCTGAAGGGCGTCACAGCTTATGGATTTGATTTTATCCGTGGAGCTCAGACCCTTGATTTGATCAAGGGTGGGTTTCCAAGCGGAAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATCTGGGCTAATGATCTCGCCGCTTCACTCAGTGTATTGCAGGATCTTGAGGGCATTGTAGGCAAAGATAAACTTGTCGTGTCCACCTCCTGCTCGCTTCTTCACACTGCTGTTGATCTTGTTAATGAGACCAAGTTGGATGACGAAATCAAGTCTTGGCTAGCTTTTGCTGCCCAAAAAATTGTTGAAGTGAATGCATTGGCCAAGGCATTGTCTGGTGGAAAAGATGAGGCCTTATTCTCGGCTAATGCCGCAGCTCAGGCTTCGAGAAAGTCCTCTCCAAGAGTGACTAACGAGGCTGTTCAGAAGGCTGCCGCTGCATTGAAAGGATCTGAACATCGCCGGGCTACTAATGTCAGTGCCAGACTGGATGCTCAACAAAAGAAGCTTAACCTTCCAATCCTCCCAACAACCACCATTGGGTCCTTCCCTCAGACTGTAGAACTGAGGAGGATCCGCCGCGAATACAAGGCTAACAAGATCTCCGAGGAAGAGTATGTTAAGGCAATTAAGGAGGAAATCCGCAAAGTCGTAGAACTCCAAGAAGAGCTTGATATTGATGTCCTGGTACATGGGGAGCCTGAGAGGAACGATATGGTTGAGTACTTTGGTGAGCAATTGTCTGGCTTTGCCTTCACTGTTAATGGGTGGGTGCAATCTTATGGATCTCGTTGCGTGAAGCCACCAATTATCTATGGTGATGTGAGCCGCCCAAAACCTATGACTGTGTTCTGGTCATCTGCTGCTCAGAGCATGACCAAACGCCCAATGAAGGGAATGCTTACTGGCCCTGTCACCATTCTGAATTGGTCCTTCGTTCGAAATGACCAACCTAGATCTGAGACCTGCTATCAGATTGCCTTGGCTATCAAGGATGAAGTAGAAGATCTTGAGAAGGGCGGTATTGGTGTCATCCAAATTGATGAGGCTGCTTTAAGAGAGGGTTTGCCTCTGAGGAAGTCGGAGCAAGCTCACTACTTGGATTGGGCTGTCCACTCCTTCAGGATCACCAACGTCGGTGTTCAGGACACCACTCAGATCCACACCCACATGTGCTACTCTAACTTCAACGACATCATCCACTCAATTATTGATATGGATGCTGATGTGATCACCATTGAGAACTCTCGTTCAGATGAAAAGCTCCTCTCAGTCTTCCGTGAAGGAGTGAAGTATGGTGCTGGAATTGGCCCCGGTGTGTATGACATCCACTCTCCCAGGATCCCACCAACTGAGGAAATTGCTGATAGGATCAACAAGATGCTTGCAGTGCTTGAGACGAACATCTTGTGGGTCAACCCTGATTGTGGGCTCAAGACTCGCAAGTACTTAGAGGTGAAGCCAGCACTCACAAACATGGTGGCCGCTGCAAAACTCATCCGCAACGAGCTTGCCAGCGCCAAGTGA 2493 0.4801 MGQQLNMLLCFHGPPIGVVKQSGLTLGNLKAGEKIRPLRFACAVLSASISPILEARTGLYTTVRTMASHIVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAADLRSSIWKQMADAGIKYIPSNTFSYYDQVLDATALLGAVPSRYGWTGGEIGFDTYFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVNFSYSSHKAVDEYKEAKALGVDTVPVLVGPVSYLLLSKPAKGVEKTFSLLSLLPKILAIYKEVVADLKAAGASWIQFDEPTLVLDLDSHKLQAFTEAYSELESSLSGLNVLIETYFADVPADAYKTLTALKGVTAYGFDFIRGAQTLDLIKGGFPSGKYLFAGVVDGRNIWANDLAASLSVLQDLEGIVGKDKLVVSTSCSLLHTAVDLVNETKLDDEIKSWLAFAAQKIVEVNALAKALSGGKDEALFSANAAAQASRKSSPRVTNEAVQKAAAALKGSEHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRIRREYKANKISEEEYVKAIKEEIRKVVELQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSAAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRSETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEQAHYLDWAVHSFRITNVGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLETNILWVNPDCGLKTRKYLEVKPALTNMVAAAKLIRNELASAK 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2202 830 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 66 830 - -
Glsi12g2202 830 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 70 459 - -
Glsi12g2202 830 SUPERFAMILY UROD/MetE-like 462 824 IPR038071 -
Glsi12g2202 830 CDD CIMS_N_terminal_like 68 432 - -
Glsi12g2202 830 SUPERFAMILY UROD/MetE-like 68 460 IPR038071 -
Glsi12g2202 830 NCBIfam 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 71 824 IPR006276 GO:0003871|GO:0008270|GO:0009086
Glsi12g2202 830 Coils Coil 525 545 - -
Glsi12g2202 830 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 460 823 - -
Glsi12g2202 830 CDD CIMS_C_terminal_like 498 821 IPR002629 GO:0003871|GO:0008270|GO:0009086
Glsi12g2202 830 Pfam Cobalamin-independent synthase, N-terminal domain 68 380 IPR013215 GO:0003871|GO:0008270|GO:0008652
Glsi12g2202 830 Gene3D - 70 590 IPR038071 -
Glsi12g2202 830 Gene3D - 455 823 IPR038071 -
Glsi12g2202 830 Pfam Cobalamin-independent synthase, Catalytic domain 497 820 IPR002629 GO:0003871|GO:0008270|GO:0009086
Glsi12g2202 830 Hamap 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 66 825 IPR006276 GO:0003871|GO:0008270|GO:0009086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2202 Glsi-ChrGlsi12 36674032 36680097 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2202 12 36674032 36680097 Glsi12g2202 12 36674032 36680097 ECH