Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2188 ATGGCGGCCGATCCAACTCAGCTACAGCTCGCCATGATGCTCGGCGCCGATTCTACTCACTTCGAATCCCTAATTTCCAATCTCATGTCCTCCACCAATGACCAACGCTCCCAGGCCGAGTCTCTCTTCAACCTCTGCAAGCAAACTCAACCCGATGCTCTTTGTCTTAAGCTTGCTCATCTCCTGCAATCTTCTTCTCACCCCGAGGCTCGAACCATGTCCGCTATTCTGCTTCGCAGACAACTCACGCTCGACGAGTCTTATCTCTGGCCCCAACTTCAACCCTCTACTCAGTCATCACTCAAGTTGGTACTTCTTAATTGCCTTCAGAGCGAGGATGTGAAATCGATTACTAAAAAGCTCTGTGATACGGTCTCAGAGCTAGCCTCTGGGATTTTGCCTGATGGCGGTTGGCCAGAGCTCTTGCCCTTCATGTTTCAGTGTGTCACGTCGGATAATTTGAAACTTCAGGAAGCAGCTCTATTGATTTTTGCTCAATTGGCTCAGTATATTGGCGAAACCCTGGTGCCTCATTTGAGTACGCTTCACTCAGTCTTCTTGCAGCGTTTGAACTCTTCCAACAGTTCGGATGTCAGAATTGCGGCTTTGTGTGCGAGTATCAATTTTATTCAGTGTTTGTCGAGTGCTGCCGATAGGGATAGGTTCCAGGATTTATTGCCACTCATGATGCAAACCTTGACAGAAGCATTGAATTGTGGTCAGGAATCCACCGCACAAGAAGCACTCGAGTTGTTGATTGAATTAGCTGGAACAGAGCCAAGGTTCTTGAGACGACAGATAGTGGATGTGGTGGGTTCAATGCTACAGATTGCTGAGGCAGAGTCTTTGGAGGAAGGGACGAGGCATTTGGCCGTTGAGTTTGTGATCACCCTTGCGGAAGCCAGGGAGCGAGCCCCTGGGATGATGAGAAAGTTGCCTCAGTTTATACGGAGATTGTTTGCTATATTGATGAATATGTTGTTGGATATCGAGGATGATCCTGCATGGCATACTGCGGCTACAGAGGATGAGGATGCAGGAGAGACTAGTAATTATGGTTTTGGACAGGAGTGCTTGGATAGACTTTCAATTTCCCTGGGTGGGAACACAATAGTACCAGTTGCTTCCGAACTGTTGCCAACTTACTTGGCTGCTCCCGAATGGCAAAAGCACCATGCCGCTCTTATTGCACTTGCTCAAATTGCAGAGGGCTGTTCAAAGGTGATGATAAAGAATCTGGAGCAGGTAGTTGCAATGATTTTAAATGCATTTCAAGATGTTCACCCCCGTGTGCGATGGGCAGCTATAAATGCTATTGGGCAATTGTCCACTGACTTGGGGCCGGAGTTGCAGGTTCAATATCACCACTTAGTTCTTCCAGCATTAGTTGGATCCATGGATGATTTTCAAAATCCCAGAGTACAGGCTCATGCTGCTTCCGCTGTGCTAAATTTTGCAGAGAATTGTACTCCAGATATCCTAAAACCTTATTTAGATGGGATTGTGAGCAAACTTCTTGTACTCTTACAGAATGGGAAGCAAATGGTTCAAGAAGGGGTTTTGACAGCTTTAGCATCAGTTGCTGATTCATCACAGGAGCAATTTCGGAAGTATTACGATGCTGTGATGCCTTACCTGAAAGCTATTTTGATGAATGCTAATGATAAATCTAATCGTATGCTTCGTGCCAAAGCAATGGAGTGCATTAGTTTGGTAGGAATGGCTGTTGGAAAGGAGAAGTTCAGGGAAGATGCCAAACAGGTCATGGACGTCTTAATGTCACTACAACAATCTCAATTGGAGACTGATGATCCAACTATAAGTTACATGTTACAAGCATGGGCACGGCTTTGCAAGTGCCTTGGACAGGACTTTCTCCCATATATGAGTTTTGTCATGCCTCCTTTGCTCCAGTCTGCTCAACTCAAGCCAGATGTGACCATTACATCTGCAGATTCTGATGCCGAAATTGATGAAGATGATGACAGCATCGAAACAATCACTCTTGGGGATAAAAGAATAGGCATTAAGACCAGTGTCCTAGAAGAGAAAGCTACAGCCTGTAACATGCTATGTTGCTATGCTGATGAGTTGAAGGAAGGATTTTTTCCCTGGATTGACCAGGTTGCTTTTGCATTGGTTCCTCTTCTTAAATTTTATTTTCATGAAGAAGTTAGGAAGGCAGCTGTTTCAGCCATGCCAGAACTGTTGCGTTCAGCTAAGTTAGCTGTTGAGAAAGGACAATCGCAAGGTCGCAATGAGACTTACATTAAGCAGTTGTCTGATTACATAGTACAAAATTTGATGGAGGCTTTACACAAGGAGCCAGAGATAGAAATTTGTGCCAGCATGTTGGATGCAATGAACGAATGCATACAGATCTCAGGACCACTTCTTGATGAAAAGCAAGTTCGGATTATTGTTGACGAGATTAAACAGGTGATTACTGCCAGTTCAACCAGAAAACATGAAAGAGCTGCGAGGGCCAAAGAAGAGGATTTTGATGCAGAAGAGAAAGAACTACTCAAGGAAGAAAATGAGCAAGAAGAAGAACTTTTTGAGCAAGTTGGTGATTGCCTGGGTACTTTGATAAAGACATTCAGGGCGTCTTTCTTGCCTTTCTTTGATGAACTTTCCTCATATCTAATGCCTATGTTTGGTAAAGATAAAACTTCAGAGGAAAGGAGAATCGCCATTTGTATATTTGATGATGTTGCTGAGCACTGTCGAGAAGCAGCTCTTAAATATTATGATTCTTACCTTCCATTCTTACTTGAAGCCTGCAATGATGAATATCCAGATGTTCGACAGGCAGCTGTTTATGGGGTTGGTGTTTGTGCAGAGTTTGGTGGATCTGTGTTCAAACCACTTGTTGGAGAGGCACTTTCAAGGTTAGATGCTGTGATAAGGCATCCAGATGCACTACATTCAGATAATATAATGGCATATGACAATGCTGTTTCAGCTCTTGGAAAAATATGCCAGTTCCACCGTGATAGAATAAATGCGACACAGGTTGTTCCTGCCTGGCTAAGTTGCTTACCTATCAAAGGTGATTTGATTGAGGCTAAGGTTGTGCATGATCAACTCTGCTCAATGGTTGAAAGGTCAGATAGAGAACTTTTAGGTCTCAACAATCAATATCTTCCCAAAATAGTTGCAGTTTTTGCCGAGGTTTTATGTGCGGGTAATGATCTGGCAACTGAACAAACTGTCAGTCGGATGATTAGTCTGTTGAGGCAGCTTCAGCAGACTTTACCACCTTCTACCCTTGATTCAACCTGGTCTTCCTTGCAGCCTCAGCAGCTGCTTGCCCTTCAATCCATTTTGTCATCATAG 3339 0.4412 MAADPTQLQLAMMLGADSTHFESLISNLMSSTNDQRSQAESLFNLCKQTQPDALCLKLAHLLQSSSHPEARTMSAILLRRQLTLDESYLWPQLQPSTQSSLKLVLLNCLQSEDVKSITKKLCDTVSELASGILPDGGWPELLPFMFQCVTSDNLKLQEAALLIFAQLAQYIGETLVPHLSTLHSVFLQRLNSSNSSDVRIAALCASINFIQCLSSAADRDRFQDLLPLMMQTLTEALNCGQESTAQEALELLIELAGTEPRFLRRQIVDVVGSMLQIAEAESLEEGTRHLAVEFVITLAEARERAPGMMRKLPQFIRRLFAILMNMLLDIEDDPAWHTAATEDEDAGETSNYGFGQECLDRLSISLGGNTIVPVASELLPTYLAAPEWQKHHAALIALAQIAEGCSKVMIKNLEQVVAMILNAFQDVHPRVRWAAINAIGQLSTDLGPELQVQYHHLVLPALVGSMDDFQNPRVQAHAASAVLNFAENCTPDILKPYLDGIVSKLLVLLQNGKQMVQEGVLTALASVADSSQEQFRKYYDAVMPYLKAILMNANDKSNRMLRAKAMECISLVGMAVGKEKFREDAKQVMDVLMSLQQSQLETDDPTISYMLQAWARLCKCLGQDFLPYMSFVMPPLLQSAQLKPDVTITSADSDAEIDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAFALVPLLKFYFHEEVRKAAVSAMPELLRSAKLAVEKGQSQGRNETYIKQLSDYIVQNLMEALHKEPEIEICASMLDAMNECIQISGPLLDEKQVRIIVDEIKQVITASSTRKHERAARAKEEDFDAEEKELLKEENEQEEELFEQVGDCLGTLIKTFRASFLPFFDELSSYLMPMFGKDKTSEERRIAICIFDDVAEHCREAALKYYDSYLPFLLEACNDEYPDVRQAAVYGVGVCAEFGGSVFKPLVGEALSRLDAVIRHPDALHSDNIMAYDNAVSALGKICQFHRDRINATQVVPAWLSCLPIKGDLIEAKVVHDQLCSMVERSDRELLGLNNQYLPKIVAVFAEVLCAGNDLATEQTVSRMISLLRQLQQTLPPSTLDSTWSSLQPQQLLALQSILSS 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2188 1112 ProSiteProfiles HEAT repeat profile. 416 454 IPR021133 -
Glsi12g2188 1112 Pfam HEAT repeat 921 948 IPR000357 GO:0005515
Glsi12g2188 1112 Coils Coil 827 851 - -
Glsi12g2188 1112 Pfam HEAT repeats 382 481 - -
Glsi12g2188 1112 Pfam Importin repeat 6 781 883 IPR041389 -
Glsi12g2188 1112 Pfam Importin repeat 282 373 IPR041653 -
Glsi12g2188 1112 Gene3D - 18 1111 IPR011989 -
Glsi12g2188 1112 PANTHER IMPORTIN BETA 25 1084 IPR040122 GO:0006606
Glsi12g2188 1112 SMART TOG_3 365 606 IPR034085 -
Glsi12g2188 1112 SUPERFAMILY ARM repeat 20 951 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2188 Glsi-ChrGlsi12 36564484 36573246 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2188 12 36564484 36573246 Glsi12g2188 12 36564484 36573246 ECH