Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2153 ATGCGTGAGTGTGAGAAGAAAGAAAGAGATGGATATGTAAGGCAAGGGCAAAAGTGGTCGCTAAATATGCGGTGGGAATGGCATAAGGTATCGGTCATTGGAAGACAAGAAAGTTTCATGGATCGCTCTATTTTTTTTATTTATTTCCCCAATATCCGTTTCCAATTCCTCGTCTCACTTTCTGACTTTCCAACAACAAATAATAAGAGGCGTTTCAGTATATTCAGAAATACAATGGCGAAGGTTTGGAGCCAAACCAGTTTGATTTCATCTTGGCATGACGGTAAACAACAACATCATCGCAGAATTTCTCTATTTCCCAAGACTCGTAACTGCGATCCTGTTGTTTCTTTCTCTGTGAAGACGTTTCCTTCTCTCAAACTAAAATCTCCGGTTCTCAGATCTTCATCCTTTTCATCTTCCGAACTTAATGGCAAAAAGCTCGTCTTTCACGAGTATAAAGGCATACCCAACAGAGGGAAATCCGTTTTTCGAGCTTCAACTGTAACTCAGATGCCTCTCAGAATTGGTAAGGCTCAAAAATGGTGGGTAACAGGGCTTGAACCCAACATGAGGGAGGTTAATTCGGCACAAGACCTTGTGGACTCCCTATTAAACGCTGGGGACAAGCTGGTGGTTGTTGATTTCTTCTCTCCTGGTTGTGGTGGTTGCAGAGCCCTCCATCCTAAGATATGTCAGCTGGCAGAGATGTATCCAAATGTTCAGTTCCTCCAAGTAAATTATGACGAACATAAATCTATGTGTTATAGTCTTAATGTCCACGTCCTTCCCTTCTTCCGCTTCTATAGAGGCGCCCATGGTCGTTTATTCAGCTTTAGCTGTACCAATGCCACGATCAAGAAGTTCAAAGATGCAATGGCCAAACACACCCCAGAAAGATGCAGCTTAGGCCCAACCAAAGGGTTGGAGGAGAAAGAACTCTTAGCTCTGTCTGCCAACAAAGATCTCTCCTTCACTTACACACCAGAACCAGTTCAACCTGTGCATGCCCCTGCACAGGAAGATTTGGTAGCAGAAGCCGCGCCAGGGCCTAGTCCAGCGACCTCCACCGAGAGAACCCTGATCACTGCTGGGAGATGA 1101 0.4478 MRECEKKERDGYVRQGQKWSLNMRWEWHKVSVIGRQESFMDRSIFFIYFPNIRFQFLVSLSDFPTTNNKRRFSIFRNTMAKVWSQTSLISSWHDGKQQHHRRISLFPKTRNCDPVVSFSVKTFPSLKLKSPVLRSSSFSSSELNGKKLVFHEYKGIPNRGKSVFRASTVTQMPLRIGKAQKWWVTGLEPNMREVNSAQDLVDSLLNAGDKLVVVDFFSPGCGGCRALHPKICQLAEMYPNVQFLQVNYDEHKSMCYSLNVHVLPFFRFYRGAHGRLFSFSCTNATIKKFKDAMAKHTPERCSLGPTKGLEEKELLALSANKDLSFTYTPEPVQPVHAPAQEDLVAEAAPGPSPATSTERTLITAGR 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2153 366 PANTHER THIOREDOXIN, MITOCHONDRIAL 163 329 - -
Glsi12g2153 366 CDD TRX_family 207 271 - -
Glsi12g2153 366 FunFam Thioredoxin-like 1-2, chloroplastic 180 298 - -
Glsi12g2153 366 ProSiteProfiles Thioredoxin domain profile. 173 298 IPR013766 -
Glsi12g2153 366 Gene3D Glutaredoxin 184 295 - -
Glsi12g2153 366 MobiDBLite consensus disorder prediction 330 366 - -
Glsi12g2153 366 SUPERFAMILY Thioredoxin-like 180 296 IPR036249 -
Glsi12g2153 366 Pfam Thioredoxin 202 273 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2153 Glsi-ChrGlsi12 36386235 36394901 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2153 12 36386235 36394901 Glsi12g2153 12 36386235 36394901 ECH