Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2113 ATGCAGTGGGGGAGCCAGCGGGATCTTCTCCGTAAACCAATTAATTCTGGAAAGCACATTGGGATACAAATACGATTAAGCAGAGGAAAGAAGGCCAAAGAGAGGCAGAAGGGAAAGATGTTGAGGACTGCAGCAAGGAGGATTTCTTCTCTCTCTTCATCTCCGTGGAGAGCAGACCAGGCCGCATCGGCTTTATTCTCTGGAAACCCCGTTAGAACCGGGGGTGGTATTTCCTCGTCCGATCACAACAGATCCAGTGCCGTTTCAGGCCCTCTTTCTCCTAGACCCGACTTCCTTGTCCCCTTCAGAGGTTTTGCTACTGAATCACTGATTCATACAAAAGAAAACAGTATTATTCCCGAGATTCCAGCGACTGTTGCAGCTATTAAGAACCCTACATCTAAGATAGTTTATGATGAGCACAACCATGAACGATTTCCTCCAGGTGACCCGAGCAAGAGAGCATTTGCCTACTTTGTTTTAACAGGCGGTAGGTTTGTCTATGCCTCTCTAGTCCGTCTTCTTATCCTCAAGTTTGTGCTCAGCATGTCAGCTAGTAAGGATGTTCTTGCTATGGCTTCACTTGAGGTTGATCTCTCTAGCCTTGAGCCAGGCTCTACAGTGACTGTTAAGTGGCGTGGAAAGCCGGTATTCATCCGTCGTCGAACAGAGGATGATATTAAGTTGGCAAACAGTGTTGATGTCGGATCTCTTCGTGACCCCCAGCAGGATTCAGAGAGAGTCAAAGACCCAGAATGGCTTATTGTGATTGGGGTTTGCACACATTTAGGTTGCATTCCCTTGCCGAATGCAGGTGACTTTGGTGGATGGTTTTGCCCATGCCATGGTTCACATTATGATATCTCTGGCAGAATCAGGAAGGGCCCAGCACCTTACAATCTGGAGGTACCAACTTATACCTTCCTGGAGGAGAACAAATTGATGATTGGTTGA 954 0.4727 MQWGSQRDLLRKPINSGKHIGIQIRLSRGKKAKERQKGKMLRTAARRISSLSSSPWRADQAASALFSGNPVRTGGGISSSDHNRSSAVSGPLSPRPDFLVPFRGFATESLIHTKENSIIPEIPATVAAIKNPTSKIVYDEHNHERFPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLAMASLEVDLSSLEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQQDSERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2113 317 MobiDBLite consensus disorder prediction 72 90 - -
Glsi12g2113 317 MobiDBLite consensus disorder prediction 67 92 - -
Glsi12g2113 317 Pfam Rieske [2Fe-2S] domain 200 303 IPR017941 GO:0051537
Glsi12g2113 317 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 247 315 IPR017941 GO:0051537
Glsi12g2113 317 NCBIfam ubiquinol-cytochrome c reductase iron-sulfur subunit 167 317 IPR006317 GO:0008121
Glsi12g2113 317 SUPERFAMILY ISP transmembrane anchor 134 190 - -
Glsi12g2113 317 Pfam Ubiquinol cytochrome reductase transmembrane region 145 188 IPR004192 GO:0008121
Glsi12g2113 317 Gene3D - 186 317 IPR036922 GO:0051537
Glsi12g2113 317 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 124 317 IPR014349 GO:0051537
Glsi12g2113 317 SUPERFAMILY ISP domain 179 316 IPR036922 GO:0051537
Glsi12g2113 317 FunFam Cytochrome b-c1 complex subunit Rieske, mitochondrial 187 317 - -
Glsi12g2113 317 CDD Rieske_cytochrome_bc1 194 317 - -
Glsi12g2113 317 PRINTS Rieske 2Fe-2S subunit signature 255 266 IPR005805 GO:0016020|GO:0051537
Glsi12g2113 317 PRINTS Rieske 2Fe-2S subunit signature 277 289 IPR005805 GO:0016020|GO:0051537
Glsi12g2113 317 PRINTS Rieske 2Fe-2S subunit signature 289 301 IPR005805 GO:0016020|GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2113 Glsi-ChrGlsi12 36148657 36156150 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2113 12 36148657 36156150 Glsi12g2113 12 36148657 36156150 ECH