Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2094 ATGAATTATTTTCCAGACGAGGTATTAGAGCACGTCTTCGACTTCGTAACGTCCCACCGGGACCGAAACGCCGTGTCTCTGGTGTGTAAAAGTTGGTACAGAGTAGAGAGATGTAGTCGGCAGAAGGTTTTCATAGGGAACTGTTACTCGATCAGTCCGGAGAGATTAATCCATAGGTTTCCTGGGCTCAAATCCCTGACTTTGAAGGGAAAACCTCATTTCGCAGACTTCAATCTGGTTCCCCAGGATTGGGGAGGCTTTGTTTATCCTTGGATTGAAGCACTGGCGAAGAGCCGGGTTGGATTGGAGGAGCTTAGGTTGAAGAGGATGGTGGTCTCGGACGAGAGCCTGGAGCTACTTTCCCGTTCCTTCGTGAATTTTAAGTCTTTAGTTCTTGTTAGCTGTGATGGGTTCACCACCGACGGCCTTGCCGCTGTAGCTGCAAATTGCCGGTTTCTTCGAGAGCTGGACCTGCAAGAAAATGAAATTGAGGATTACAAAGGCCAATGGATAAGCTGTTTTCCTGATACGTGTACATCGCTTGTCTCTCTCAATTTTGCTTGTCTTAAAGGAGAGATTAATTTGGGAGCTCTTGAGAGACTTGTGGCCAGATCTCCTAACCTAAAGAGTTTAAGGCTGAACCGAGCTGTGCCCCTTGACACACTCCAAAGGATATTGATGCAAGCACCTCAGATAGCAGACTTAGGTACGGGGTCTTTTGTTCAAGATCCAGATTCTGTAACCTACACCAAGCTGAAGAATACCATTCTTAAGTGCAAATCGATAACCAGTTTGTCAGGGTTTTTGGAGGTTACTCCTCACTGCCTATCAGCTATATATCCTATTTGCTTGAACTTGACTTCCTTGAACCTGAGCTATGCAGCAGGTCTTCAGGGCAACGAGCTGATAAAACTAATTCGTCACTGTGGGAAACTTCAGCGCTTATGGATACTGGATTGCATTGGAGACAAAGGACTAGGTGTTGTTGCTTCCACATGTAAAGATTTACAAGAATTAAGGGTTTTTCCATCTGTTCCCTTTGGGGTTGGGCCTGCAGCTGTAACAGAAAATGGACTTGTTGCTATATCGATGGGCTGCCCCAAGCTTCACTCATTGCTCTACTTCTGCCAGCAAATGACAAATGCTGCCCTCATAACAGTGGCGAAGAACTGCCCAAATTTTATCCGCTTTAGGTTGTGTATCCTGGAGCCCACAAAACCTGACCCTGATACAATGCAGCCACTGGATGAAGGTTTTGGGGCAATTGTTCAGTCTTGCAGGCGTCTTAGGCGGTTGTCACTCTCTGGCTTGTTGACTGATCAGGTTTTTCTTTACATAGGAATGTACGCTGAGCAACTGGAAATGCTGTCTATTGCATTTGCTGGAGAAAGTGACAAGGGAATGCTGTATGTGTTGAATGGTTGTAAGAAGCTTAAAAAGCTTGAAATAATGGATAGTCCTTTTGGAAACAGGGCACTTCTAACGGACGTAGGGAAGTATGAAACAATGCGATCCCTTTGGATGTCGTCCTGTGAAGTGACCTTTGGAGCCTGCAAGTTGCTTGCTAGGAAGATGCCCCGGCTCAATGTGGAGATCATGAATGAGAATGAGCAGGCAGAGTTTAATCTGGAAGATGGGCAGAAAGTAGATAAGATGTACTTGTATCGGACATTGGTTGGGAAAAGGAGAGATGCACCAGAATTTGTATGGACTCTGTAG 1719 0.4567 MNYFPDEVLEHVFDFVTSHRDRNAVSLVCKSWYRVERCSRQKVFIGNCYSISPERLIHRFPGLKSLTLKGKPHFADFNLVPQDWGGFVYPWIEALAKSRVGLEELRLKRMVVSDESLELLSRSFVNFKSLVLVSCDGFTTDGLAAVAANCRFLRELDLQENEIEDYKGQWISCFPDTCTSLVSLNFACLKGEINLGALERLVARSPNLKSLRLNRAVPLDTLQRILMQAPQIADLGTGSFVQDPDSVTYTKLKNTILKCKSITSLSGFLEVTPHCLSAIYPICLNLTSLNLSYAAGLQGNELIKLIRHCGKLQRLWILDCIGDKGLGVVASTCKDLQELRVFPSVPFGVGPAAVTENGLVAISMGCPKLHSLLYFCQQMTNAALITVAKNCPNFIRFRLCILEPTKPDPDTMQPLDEGFGAIVQSCRRLRRLSLSGLLTDQVFLYIGMYAEQLEMLSIAFAGESDKGMLYVLNGCKKLKKLEIMDSPFGNRALLTDVGKYETMRSLWMSSCEVTFGACKLLARKMPRLNVEIMNENEQAEFNLEDGQKVDKMYLYRTLVGKRRDAPEFVWTL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2094 572 FunFam Transport inhibitor response 1 41 572 - -
Glsi12g2094 572 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 82 531 - -
Glsi12g2094 572 Gene3D Ribonuclease Inhibitor 41 572 IPR032675 -
Glsi12g2094 572 CDD F-box_AtTIR1-like 1 40 - -
Glsi12g2094 572 SMART LRR_CC_2 366 390 IPR006553 -
Glsi12g2094 572 SMART LRR_CC_2 426 449 IPR006553 -
Glsi12g2094 572 SMART LRR_CC_2 99 123 IPR006553 -
Glsi12g2094 572 SMART LRR_CC_2 124 149 IPR006553 -
Glsi12g2094 572 SMART LRR_CC_2 283 308 IPR006553 -
Glsi12g2094 572 SMART LRR_CC_2 309 332 IPR006553 -
Glsi12g2094 572 SUPERFAMILY RNI-like 16 532 - -
Glsi12g2094 572 SMART fbox_2 4 43 IPR001810 GO:0005515
Glsi12g2094 572 Pfam F-box 2 41 IPR041567 -
Glsi12g2094 572 Gene3D - 1 40 - -
Glsi12g2094 572 FunFam Transport inhibitor response 1 1 40 - -
Glsi12g2094 572 Pfam Transport inhibitor response 1 protein domain 61 107 IPR041101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2094 Glsi-ChrGlsi12 36048897 36051359 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2094 12 36048897 36051359 Glsi12g2094 12 36048897 36051359 ECH