Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2075 ATGGGTAGCACATTCAATCCACAGATTTTAGTGGAAAAGCTAGCCAAGCTGAATAGTTCACAGACGAGCATAGAGACTTTGTCACATTGGTGCATTTTTCATATGAACAAAGCCAAACAAGTTGTTGAAACATGGGACAGGCAATTTCATTGTTCTAATCGTGAGCAGAGATTGCCATTTCTATATCTTGCCAATGATATATTGCAGAACAGTAGGCGAAAGGGTTCAGAATTTGTAGGTGAATTCTGGAGGGTTCTTCCTGATGCTCTTCGAGATGTGATTAATAATGGAGATGAGTTTGGAAGGAATGCTGCACTTCGACTGATTGGTATTTGGGAAGAGAGAAAAGTTTTTGGTTCTCGTGGTCAAATTCTTAAGGAAGAGTTTGTTGGGAGGCATGTGGAAAATGGTAGCCGTAATGGGAAACCCGTTAATTTGAAGCTGAGGCCATCTGCTGGGAATGCATTGGAGAAAATAATTTCAGATTATCATGTTGTTTATGGAGGGAAGACAGATGAAGATGCTGTATTGAGCAAATGCAGGAATGCTATTAGCTGTCTCGAGAAAGTAGATAAGGATATTGGTCAAGGTAGTAATTCAGTGGATGAGCTCCAGGGACATAATGCTGTACTGAGGGACTGCATTGAGCAATTGACAGCAATAGAGTCATCAAGAGCAAGCCTTGTGTCTCATCTGAGAGAGGCTCTCCAGGATCAGGAATTCAAGCTGGATCAAGTCCGTAACCAGATCCAGGCTGCACGTGTTCAGTCAGAGCAGGTTGGAAATACCTGCCAGCGATTATTAAATGGCAACAACATTCAGTCGTTAGCTGAGAAGAACTCCAAGGAAATTCAGACCTCCTTAACACCTCCCAGATTTATTCCTGGAGATAGGGAGCAATCAGCTCCATTGATGTATACACAGCAAGTATCTTTTCCTCAAAAATCTGGACCCATTGAGGAAGATCCAAGGAAGTCTGCAGCTGCTGCAGTAGCAGCAAAGCTAACTGCTTCAACATCCTCTGCCCAGATGCTATCTTATGTTCTATCGTCCTTAGCATCGGAAGGGGTCATAGGCAATTCAATTAAAGAGTCTTCTGGTGATTATCATCCTGAGAAGAGGACTAAGCTGGAGAGTGACCAATCATCTTATATACCATCTCATATTCCTCAGCAGCAGCCACTTGCTGAATCTCTCCAACACAATGTATCTACGACCAATCAGCTATCTACTCCCAATGAACCACCTCCTCCACCCTCATCATCACCTGCCTCATTGCCACTGCAACTACCTGTAACACAGTACCAAGTGCCACAGTTCATGCAGACTGTTGGATCAATTAGCAATGTAGCATATAGCTATAGCATGACAGAACAACAACCGTCAATCGCAGCCTACCCAACTGTTGGAGCTTCCCTTAATGGTATTTCCCCATTTACACCAGCGTCAATGAGTTCTTACCAGGGTTTTCAGGGTTCTGATGGAAATTACTATAACCAGCCCTCATCAATGCCCATGGCCCCAATCTCTCGGCAATAA 1539 0.436 MGSTFNPQILVEKLAKLNSSQTSIETLSHWCIFHMNKAKQVVETWDRQFHCSNREQRLPFLYLANDILQNSRRKGSEFVGEFWRVLPDALRDVINNGDEFGRNAALRLIGIWEERKVFGSRGQILKEEFVGRHVENGSRNGKPVNLKLRPSAGNALEKIISDYHVVYGGKTDEDAVLSKCRNAISCLEKVDKDIGQGSNSVDELQGHNAVLRDCIEQLTAIESSRASLVSHLREALQDQEFKLDQVRNQIQAARVQSEQVGNTCQRLLNGNNIQSLAEKNSKEIQTSLTPPRFIPGDREQSAPLMYTQQVSFPQKSGPIEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNSIKESSGDYHPEKRTKLESDQSSYIPSHIPQQQPLAESLQHNVSTTNQLSTPNEPPPPPSSSPASLPLQLPVTQYQVPQFMQTVGSISNVAYSYSMTEQQPSIAAYPTVGASLNGISPFTPASMSSYQGFQGSDGNYYNQPSSMPMAPISRQ 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2075 512 Pfam CID domain 9 120 IPR006569 -
Glsi12g2075 512 Coils Coil 229 256 - -
Glsi12g2075 512 FunFam ENTH/VHS family protein isoform 1 2 130 - -
Glsi12g2075 512 SMART 558neu5 9 130 IPR006569 -
Glsi12g2075 512 MobiDBLite consensus disorder prediction 411 425 - -
Glsi12g2075 512 SUPERFAMILY ENTH/VHS domain 11 117 IPR008942 -
Glsi12g2075 512 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
Glsi12g2075 512 Gene3D - 2 129 IPR008942 -
Glsi12g2075 512 MobiDBLite consensus disorder prediction 361 427 - -
Glsi12g2075 512 CDD CID_RPRD_like 7 128 - -
Glsi12g2075 512 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 493 - -
Glsi12g2075 512 MobiDBLite consensus disorder prediction 490 512 - -
Glsi12g2075 512 MobiDBLite consensus disorder prediction 380 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2075 Glsi-ChrGlsi12 35933845 35939666 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2075 12 35933845 35939666 Glsi12g2075 12 35933845 35939666 ECH