Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2043 ATGCCTGCGATTCCGGAAGAGCCACTGCTCACTCCAAACCCTGACAGATTCTGCATGTTCCCCATACAGTACCCTCAGATATGGGAAATGTACAAGAAGGCTGAGGCCTCTTTTTGGACTGCCGAGGAGGTCGACCTCTCTCAGGACATTCGCCATTGGGAATCCCTCACTCAGGGCGAGAAGCACTTCATCACCCACGTCCTCGCTTTCTTCGCAGCCTCCGACGGCATCGTTCTAGAAAATTTGGCTGGTCGATTCATGAAGGAAGTTCAATCCTCCGAGGCACGTGCTTTCTATGGGTTCCAGATTGCCATCGAAAACATTCACTCCGAGATGTATAGCCTGCTGCTGGAGACCTATATCAAGGATTCCAATGAGAAGAACCGGTTGTTTCGCGCCACAGAGACCGTGCCCTGTGTGGCCAAGAAGGCTGAGTGGGCCCTCCGCTGGATCGACGGTTCAGAATCGTTCGCGGAGCGCTTGATTGCCTTCGCTTGCGTGGAGGGTATTTTCTTCTCCGGCAGCTTCTGCGCGATATTTTGGCTGAAGAAGCGCGGGTTGATGCCGGGCCTCACTTTTTCGAACGAGTTGATCTCGCGAGACGAAGGGCTGCACTGCGACTTCGCGTGCCTGCTGTATTCGCTGCTGAGGAAGAAATTGAGCGAGGAGCGAGTGAAGGGAATCGTTCGTGACGCGGTAGACATAGAGAGAGAGTTCGTGTGCGAGGCGCTCCCGTGCGCTCTGGTGGGGATGAACGGTGATCTAATGAGCCAATACATAGAGTTCGTGGCCGATAGGTTGCTGGGTGCATTGGGGTGCGGGAAGATATACAATGTTCGGAACCCCTTTGATTGGATGGAGCTGATTTCGTTGCAGGGGAAGACCAATTTCTTCGAGAAACGCGTCGGAGATTATCAGAAGGCCGCCGTCATGTCCAGCTTAAATGGGAATGGTGGGACTCGTGTGTTCAGGATGGATGAAGATTTTTAA 990 0.5323 MPAIPEEPLLTPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDIRHWESLTQGEKHFITHVLAFFAASDGIVLENLAGRFMKEVQSSEARAFYGFQIAIENIHSEMYSLLLETYIKDSNEKNRLFRATETVPCVAKKAEWALRWIDGSESFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVKGIVRDAVDIEREFVCEALPCALVGMNGDLMSQYIEFVADRLLGALGCGKIYNVRNPFDWMELISLQGKTNFFEKRVGDYQKAAVMSSLNGNGGTRVFRMDEDF 329
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2043 329 CDD RNRR2 17 291 IPR033909 GO:0009263
Glsi12g2043 329 Gene3D Ribonucleotide Reductase, subunit A 3 307 IPR012348 GO:0016491
Glsi12g2043 329 SUPERFAMILY Ferritin-like 5 307 IPR009078 -
Glsi12g2043 329 ProSitePatterns Ribonucleotide reductase small subunit signature. 105 121 IPR030475 -
Glsi12g2043 329 Pfam Ribonucleotide reductase, small chain 16 282 IPR000358 GO:0009263
Glsi12g2043 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 8 328 IPR000358 GO:0009263
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi12g2043 Glsi-ChrGlsi12 35747232 35748221 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2043 12 35747232 35748221 Glsi12g2043 12 35747232 35748221 ECH