Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2021 ATGTGGCGCCGATTGGCTCCACATGGACATTATGGTATGCTTCCTGAGCTTCAACTGCGCACTTAGTTATTGATTGTACTTCTTTTACCTGATTTCAATTCAAGTTTTATCGGCCAAGAAGCAGTAAAGTATATGTGCCAGTGCCAGGACGGTGCTGGTCAGGGAGGTCATAAGAAAGTTTACTCTCTACCAAACTGTGATTGGAGGCACTTTGTCCCCAATTTAACCATTGGTGCTCCAGTCATTGAAAGCTTGAGAAAGCACACAAAGGCATATCTGGACTGTCATTTGATGGTCACTAATCCTCTTGATTATGTTGAACCTTTGGGAAAGGCTGGTGCTTCTGGTTTTACATTTCATGTAGAGTTCTTGTGGACAGATAACTGGCCAGAACTTGTCCAAAGAATAAAATCAGAAGGCATGAGGCCAGGTGTAGCATTAAAGCCTGGGACACCCATTGGAGATGTTTATCCTCTGGTTGAAGCTGAAAATCCTGTTGAAATGGTTCTTGTGATGACTGTAGAACCTGGATTTGGAGGACAGAAATTTATGCCTGAGATGATGGATAAGGTACGGTTGCTCAGGAAGAAGTATCCAACCCTTGATATTGAGGTTGATGGTGGATTAGGGCCTTCAACCATTGGCATGGCTGCATCTGCAGGAGCAAACTGCATTGTTGCAGGAAGCTCAGTGTTTGGAGCCCCTGAGCCAGCTCAAGTAATATCCTTGATGAGGAATAGTATTGAGAAAGCCCAGCAAACAAGTTGA 768 0.4414 MWRRLAPHGHYGMLPELQLRTXLLIVLLLPDFNSSFIGQEAVKYMCQCQDGAGQGGHKKVYSLPNCDWRHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEFLWTDNWPELVQRIKSEGMRPGVALKPGTPIGDVYPLVEAENPVEMVLVMTVEPGFGGQKFMPEMMDKVRLLRKKYPTLDIEVDGGLGPSTIGMAASAGANCIVAGSSVFGAPEPAQVISLMRNSIEKAQQTS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2021 255 CDD RPE 70 245 IPR000056 GO:0005975|GO:0016857
Glsi12g2021 255 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 2. 169 191 IPR000056 GO:0005975|GO:0016857
Glsi12g2021 255 Gene3D Aldolase class I 54 255 IPR013785 -
Glsi12g2021 255 Pfam Ribulose-phosphate 3 epimerase family 70 232 IPR000056 GO:0005975|GO:0016857
Glsi12g2021 255 FunFam ribulose-phosphate 3-epimerase isoform X2 50 255 - -
Glsi12g2021 255 SUPERFAMILY Ribulose-phoshate binding barrel 66 250 IPR011060 -
Glsi12g2021 255 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 69 253 IPR000056 GO:0005975|GO:0016857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2021 Glsi-ChrGlsi12 35646759 35650585 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2021 12 35646759 35650585 Glsi12g2021 12 35646759 35650585 ECH