Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1517 ATGTCGCTCCACGGCGGCTCCACAGACCGCCGGGAAGTGGCATCGCCGGCAGCCGGGAATGCCGTCTCCGGTGGCGGAAATGGCGTCCTCGCAAGCGACTCTAGCAGGCCGGGGACGATAGTTTCGAGCCAGAGGCTGCGGTTGAATCCGAACAAGGACCACAAGCCAGATGTCTATGAGGACTTGCAGTTGGATTTCAACCCGTCGATTTTTAGCTCGCTGGAGAGGTACCTGCCTCCCAATATGCTCAGCGTGCCCCGTGACGACAAGGTTAACTTCATGCAGGAGATTTTGCTCAAGTATCTTCCCCACGGAGAGCAGAACAGAGCTCAAAAGCATAGAGAATACAGACAGAAGATAATATCAAATTATCAGCCTTTACATCGAGAGTTGTACACTATGAATCCTACAACTTTCTTTGTCCCAGCATTTCTGAAAGCAATCAATGATAATACAGAACAAAGCTTTAGAAGTATAATGTCTGAGCCCTCCCCAGGCATTTTTACATTTGAAATGCTCCAGCCTCGCTTCTGTGAGCTATTGTTATCTGAGGTTGAAAATTTTGATAAGTGGGTGAACGAAACAAAATTTCGAATCATGCGGCCCAATACAATGAACAAATATGGGGCTGTACTTGATGATTTTGGCCTTGAGACCATGCTTGACAAGCTTATGGAAGGTTTTATTCGTCCTATATCTAAAGTGTTCTTTTCAGAAGTTGGCGGATCAACCGTGGATTCTCATCATGGATTTATTGTTGAATATGGTAAAGATAGAGATGTGGACTCGGGTTTCCATGTGGATGACTCAGAAGTAACCTTGAATGTTTGCTTGGGTAAGGAATTTTCTGGAGGGGAATTGTTTTTTCGGGGCACGCGATGTGATAAACATGTAAATACAGGGAGTCAGTCAGAGGAGATCTTTGATTATTCCCATGTCCCTGGACGAGCTGTGCTTCATCGTGGTCGTCATCGCCATGGTGCAAGAGCTACGACATCTGGTCATCGGATCAACCTACTTCTGTGGTGCAGAAGTTCTGTCTTCAGAGAGATGAAAAAGTATCAAAAAGATTTCTCCAGCTGGTGTGGTGAGTGTAATCGTGAGAAGAAAGAAAGGCAGCGTTCATCAATTGCTGTGACCAAATCGGAACTGTTCAGGAGGGAAGGTGAATCCGCCACATAA 1182 0.4611 MSLHGGSTDRREVASPAAGNAVSGGGNGVLASDSSRPGTIVSSQRLRLNPNKDHKPDVYEDLQLDFNPSIFSSLERYLPPNMLSVPRDDKVNFMQEILLKYLPHGEQNRAQKHREYRQKIISNYQPLHRELYTMNPTTFFVPAFLKAINDNTEQSFRSIMSEPSPGIFTFEMLQPRFCELLLSEVENFDKWVNETKFRIMRPNTMNKYGAVLDDFGLETMLDKLMEGFIRPISKVFFSEVGGSTVDSHHGFIVEYGKDRDVDSGFHVDDSEVTLNVCLGKEFSGGELFFRGTRCDKHVNTGSQSEEIFDYSHVPGRAVLHRGRHRHGARATTSGHRINLLLWCRSSVFREMKKYQKDFSSWCGECNREKKERQRSSIAVTKSELFRREGESAT 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1517 393 Gene3D q2cbj1_9rhob like domain 167 345 - -
Glsi12g1517 393 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 246 345 IPR005123 -
Glsi12g1517 393 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 36 382 - -
Glsi12g1517 393 SMART p4hc 165 344 IPR006620 GO:0005506|GO:0016705|GO:0031418
Glsi12g1517 393 MobiDBLite consensus disorder prediction 1 54 - -
Glsi12g1517 393 MobiDBLite consensus disorder prediction 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1517 Glsi-ChrGlsi12 32163928 32171053 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g1517 12 32163928 32171053 Glsi12g1517 12 32163928 32171053 ECH