Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1319 ATGCCCCAGAACGAAAGCCACTGCCATCATGGTACGCTTACCACTAGCTCAACCCCCTACGAGAGCCCCGTTCTGACGTTGAATCTCAGAGAACCAGAAAAGCCTATTTTTGACACCAATTTGGACTCCCTTTGCCCAATGACTTCCACAACTTCGACATCCACTGACCCACTTCCTTCCGCCGACGATATAGCCGTCAAGGCCGTCAACAAACGCTACGAAGGATTGGTCACTGTGCGAACCAAAGCTATCAAGGGTAAAGGAGCTTGGTACTGGGCGCATTTGGAACCCATTCTGATTCGAAACGCCGATACTGGCGTCCCCAAATCCGTGAAGCTTAAATGCTCCTTGTGTGACTCTGTGTTCTCGGCTTCGAACCCATCGAGAACTGCTTCAGAACACTTGAAAAGGGGTACTTGCCCCAATTTCATCTCTGGTTTGAAACCCAATTCCTCACTTTCACCGTTGCCGATATCTTCGGTGGCTTTTCCAGCTTCAAGCAATCACAAGAAGCGAAGCTCTCCTCAAATGGGCGCCACTTCTCCTCCTCCTAGTTATCAAAATCATTCATTGGCAATGGTCGAGTCCTCTCGGTTTTATGGTGAACTGGGTTATTCGCAGGTGCACAACTCAGTTGGGGTAGTGAGTCACACAGGCATAAGTCAGCAGCATTTAGTGCTTTCTGGTGGGAAGGAAGATTTGTGTGCATTGGCTATGTTTGAGGATAGTGTGAAAAAACTCAAGAGTCCTAAGGCCTCACCTGGTCCTGTTTTAAGCAAGGAACAGATTAACTCTGCTCTAGAGTTGCTTGCGGATTGGTTCTACGAATCATGTGGGTCTGTATCGTTCTCCGCCCTTGAGCACCCCAAACTTCAAGCCTTCCTCAGCCAGGTAAGTTTGCCGACGACAACACTACGACGTGAAATCTCAGGTTCTCGACTCGATGCTAAGTTCAATGAGGTGAAAACTGAGTCAGAAGCTAAAATAAGAGATGCGATGTTCTTTCAATTATCTAGCGATGGCTGGAAGAACGAGAACTGGTATAGCTTGTGTTGTGGGGGAGAGAATGTGGTGAAGTTTACGGTTAATCTTCCAAATGGGACTAGTGTATTCCAAAAGGCAGTGTTTACTGGGGGAGTGACGTCCTCCAAGTACGCAGAGGAGATTTTATGGGAAACGGTCTCGGGTATTAGTGGGAATGTTGTGCAGAGATGCGTAGGAATTGTTGCAGACAAATATAAGGCCAAGGCACTGAGGAACTTGGAGTTTCAGAATCATTGGATGGTAAATATTTATTGTCAGCTTCAGGGGTTCATTAGTTTAATCAAGGATTTTAACAAAGAGCTCCCACTTTTCAGGGTTGTGACTGAAAGTTGCCTAAAGGTTGCAAATTACATAAACAATGAATCTCAGGTGAGGAACATTTTTCTCAAGTACCGGATGCAGGAGCTTGAATATGCTGGGTTGCTTCGAGTTCCTTCGCCTAAATGTGATGCTTTGAAGAATTTTGCATCTGTCTTTCCAATGTTGGAGGACATCCTGAGCTGTGCTAGAGTGATCCAAATGGTAATGTTGGAAGAGTCGTTTAAAGTAACATGCATGGAGGATCCACTAGCAGGGGAAATTGCTGCAATGATTCAGAGTGAGGGGTTTTGGAATGAACTGGAGGCAGTTTATTCGCTTGTAAAGCTTATCAGAGGAATAGTTCAGGATATTGAGGTTGAGAGGCCACTAATTGGTCGATGCCTGCCTCTTTGGGAGGAGACGAGGACCAAAGTGAAGGAGTGGTGCGACAAATACAGTGTTGCGGAAGGACCTGTGGAGAAAATACTTGAAAAACGATTTAGAAAAAACTATCACCCCGCCTGGTCAGCTGCATTTATACTCGACCCACTTTACTTGATTAAAGACACAAGCGGAAAGTACCTTCCTCCATTCAAATGCTTGACGCGTGAACAGGAGAAAGATGTAGATAAATTATTGACGAGGCTAGCTTCCCGAGAAGATGCTCATGTTGTCTTGATGGAGCTCATGAAATGGAGGTCAGAAGGGCTCGACCCACTTTATGCACAGGCAGTTCAAATGAAACAAAGGGACGCGGTGACTGGGAAGATGAAACTTGCAAATCCACAGAGCAGTAGACTTGTTTGGGAAACTTGCCTGAGTGAGTTTAAATCCCTGGGGAAGATTGCAGTAAGGCTTATTTTTCTCCATGCAACTTCATGTGGACTTAAGAGTAATTGGTCATTCATGAAAAATGTTTCTGCAAATAAACACTCAAGAGTTGCCATGGAGAGAGCTCAAAAAATGATATACATTGCAGCCCATGCCAAGCTTGAAAGACGAGATTTTGCTAATGAGGAAGAAAAGGATGCAGAACTGCTTGCCATGACTGGTAGTGAGGATGGCATGCTGGCTGAGGTCTTTGCTGATGCACCCTTAGTGTAA 2448 0.4547 MPQNESHCHHGTLTTSSTPYESPVLTLNLREPEKPIFDTNLDSLCPMTSTTSTSTDPLPSADDIAVKAVNKRYEGLVTVRTKAIKGKGAWYWAHLEPILIRNADTGVPKSVKLKCSLCDSVFSASNPSRTASEHLKRGTCPNFISGLKPNSSLSPLPISSVAFPASSNHKKRSSPQMGATSPPPSYQNHSLAMVESSRFYGELGYSQVHNSVGVVSHTGISQQHLVLSGGKEDLCALAMFEDSVKKLKSPKASPGPVLSKEQINSALELLADWFYESCGSVSFSALEHPKLQAFLSQVSLPTTTLRREISGSRLDAKFNEVKTESEAKIRDAMFFQLSSDGWKNENWYSLCCGGENVVKFTVNLPNGTSVFQKAVFTGGVTSSKYAEEILWETVSGISGNVVQRCVGIVADKYKAKALRNLEFQNHWMVNIYCQLQGFISLIKDFNKELPLFRVVTESCLKVANYINNESQVRNIFLKYRMQELEYAGLLRVPSPKCDALKNFASVFPMLEDILSCARVIQMVMLEESFKVTCMEDPLAGEIAAMIQSEGFWNELEAVYSLVKLIRGIVQDIEVERPLIGRCLPLWEETRTKVKEWCDKYSVAEGPVEKILEKRFRKNYHPAWSAAFILDPLYLIKDTSGKYLPPFKCLTREQEKDVDKLLTRLASREDAHVVLMELMKWRSEGLDPLYAQAVQMKQRDAVTGKMKLANPQSSRLVWETCLSEFKSLGKIAVRLIFLHATSCGLKSNWSFMKNVSANKHSRVAMERAQKMIYIAAHAKLERRDFANEEEKDAELLAMTGSEDGMLAEVFADAPLV 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1319 815 MobiDBLite consensus disorder prediction 1 21 - -
Glsi12g1319 815 SUPERFAMILY Ribonuclease H-like 377 780 IPR012337 -
Glsi12g1319 815 PANTHER OSJNBA0013A04.12 PROTEIN 69 781 - -
Glsi12g1319 815 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1319 Glsi-ChrGlsi12 30682203 30684650 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1689 01 78006161 78008596 Glsi12g1319 12 30682203 30684650 CCT
Glsi01g1689 01 78006161 78008596 Glsi12g1319 12 30682203 30684650 ECH
Glsi12g1319 12 30682203 30684650 Glsi12g1319 12 30682203 30684650 ECH