Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0933 ATGGCTGCCAAGGGACAGAAGAGTAACCAACCTGATCCAGAAGATGGGCATATGAAAATCCCAGTGTTCACGGTGATGAAGAACGTGCATGGGACGTGGGTATCAGAGAGGAAGATTGAGGCTGGGGTGAGTGTGCAGCTAAAGGAGGGTGACACCTTGAGAATCGGGGGTTCAAGCAGAGTTTATAGGCTGCATTGGATTCCTATAAGCCGTGCGTATGATTTGGAAAATCCCTTTGTGTCGGCATTTGATTTGGCTGTGGAAACAGAAAAAGGAGAGGAGGACGATGCATTACCTGAAGAAGAAAAAGATGATATAGTGCAGCACAACGAGAAATTTTGTTCAGTATATGATGAAGAAGTTCAATCAGTGGATTCAATTCTGGATTCAATTCATTGTTTGTTCGCTGATGAGAATTTGGAATTATTAGTGAAGGAGGAAATTCATTCAGCACCTTCAATGCCAGAAGACGTCTTTTCTGTATGTTGTGATGCAGAAGGGAATTGCCCATCCATAGATGATCACCAAGAGGGGAAAATTGCTAGATTTGCAAGCTTCTTTGGAGCAGAAACATCAAATTTACCTAAGAACTCTGAGAGTGAGCAAGTTCTATCACCGCCTCATGTAGAACCAGTTGTTGAATGTGATAACCCAAAAATAGCATTTGAGGAGAGAATCTCTAATTTTTCCGTGAGCATGGAATCTTTATTCCATGTGAAGGGGGAAATTGAGGCTTATCCTGAAGCAGATAATCCCAGAGAAACCAACATTTTAAGCACATTGGGAGAATATTTGAGAGAGAGTATCTGTTTGCCGGTTGTTGAAGCTGTCCAAGGGACCAAAATGGAGCAATTCCATGACGTAAAGCAAAATGCCCCACCCGATGCATTTACTTCACAATTACCCCCTGTTAAGCAAAAGGCTCCCTTTGAAAAGCCTTGGTCCAACTCGCTTATAAATCTGGATCCTGCACCTTTTGATATAGAAAATGGGGAAGAAGAAGAGATCTTCACTCCGGATAAGGAAAACTTTAGCCCAAATACACTTCAATTGCGGTTTCTGAAGAAAGGTAAGGTGGAAGACATTAAACATTCCAAGTCACGAAAGTCAAACAATTTAAAGGATAATTTGAGCCCCAACATCTATTATGATGAAATCTCCATTTCAGAAAAAAAGAACCAGACTCCCAAAGTTGCCCAAGAACAGAAGTCGGGAAGAAGGCCCTTTGGCAGTTATATCAAGTTGGAGCAAGAGCAAGATATTATGGATTTGAGCAATCAGAAGGATATCATAAATAAGGCAATTCCAAAGGATCTTTTGCATGTTTTGGATGGGGAAGAAGAAGAAGAAGAAGAAATCTTCACTCCAGATAAGGAAAACTTCAGTCCAAATAGCCTTCAGTTGCTATTTCTGAAAAAGGAGGGTAAGCTGGAAGAAATTAAACATTCCAAATCAATAAGGTCACACAGTTCCAATGCTAATTTTAGCCCCAACATCTATCCAGATGAAAGCTATATCCCCATTTCAGAAAACGAGGACCGGACTCCAAAAGTTGCCAAAGAACAGAAGTCGGAAAGAAGGACCTTTGGCAGTAATATCAAGTTGAAGCAAGATATTGTGGCACTGGAGAACAGATTGGAAAGGTTACCCTTTCAATCACTACTTATGAACTCTAGAGGCAAGAGCAGACCAGAGATTTCTCGTCCAGTTTCTGCCGCGGAAAACATAAATTCCAGTAATTGTGCACAATTTTTAGACAAATGCATTAACCCTTCTCATATTAGTAAGAGGAGCTGGAACATGGTTGTGGACACTGCTTCTCTTCTGAACAGGGAGTCAAGGAAAGCTCTGCTGCTTTTACAAGGTCTCAAGGGCACTCGTTTAATCATTCCAAGAATGGTCATAAAGGAACTAGACAGCATAAAGCGACAATTTAGTTTTTTCAGAAGAACATCAGAGGCTTCTTTGGTATTGGAATGGATTGAAGAATGTATGGTGAAGACAAAGTGGTGGATTCATGTTCAAAGCTCAATGGAGGAGGGAAGGTTGATTGCTCCCACCCCACCTGCTTCTCCTCAGACTCAATTTAGTGAAGAGAGTTGGACTTTGCCCCCTTCATCCCACAAGAGCTCAATGGAAATTGCTTCACCGACGGCCGAAGATCATATCCTTGACTGTGCTCTTATGTATAGAAGAATGCAGAATGATGAACAGCTTGTTGTGCTTAGCGATGATGTCACATTGAAAATCAAATCCATGGCGGAGGGGTTGCTTTGTGAGACAGTGCAGGAATTTCGTGAGAGTCTGGTAAATCCATTCTCTGAGAGGTTCCTGTGGGCCAATAGCTCTCCTCGAGGACTGACTTGGTCTTGTCAAGATGATGTAGTTTTGAGGGAGAAATATTGCCGTTTCCCTTTGAGGAAATCATCAAAGGGAGAAGGTGCAAGGGGTCTGAAGCTCATTCTGCTTCACAATTCTCGTTATGGGAAGATCAGTTCAGCCCGCTGA 2508 0.4211 MAAKGQKSNQPDPEDGHMKIPVFTVMKNVHGTWVSERKIEAGVSVQLKEGDTLRIGGSSRVYRLHWIPISRAYDLENPFVSAFDLAVETEKGEEDDALPEEEKDDIVQHNEKFCSVYDEEVQSVDSILDSIHCLFADENLELLVKEEIHSAPSMPEDVFSVCCDAEGNCPSIDDHQEGKIARFASFFGAETSNLPKNSESEQVLSPPHVEPVVECDNPKIAFEERISNFSVSMESLFHVKGEIEAYPEADNPRETNILSTLGEYLRESICLPVVEAVQGTKMEQFHDVKQNAPPDAFTSQLPPVKQKAPFEKPWSNSLINLDPAPFDIENGEEEEIFTPDKENFSPNTLQLRFLKKGKVEDIKHSKSRKSNNLKDNLSPNIYYDEISISEKKNQTPKVAQEQKSGRRPFGSYIKLEQEQDIMDLSNQKDIINKAIPKDLLHVLDGEEEEEEEIFTPDKENFSPNSLQLLFLKKEGKLEEIKHSKSIRSHSSNANFSPNIYPDESYIPISENEDRTPKVAKEQKSERRTFGSNIKLKQDIVALENRLERLPFQSLLMNSRGKSRPEISRPVSAAENINSSNCAQFLDKCINPSHISKRSWNMVVDTASLLNRESRKALLLLQGLKGTRLIIPRMVIKELDSIKRQFSFFRRTSEASLVLEWIEECMVKTKWWIHVQSSMEEGRLIAPTPPASPQTQFSEESWTLPPSSHKSSMEIASPTAEDHILDCALMYRRMQNDEQLVVLSDDVTLKIKSMAEGLLCETVQEFRESLVNPFSERFLWANSSPRGLTWSCQDDVVLREKYCRFPLRKSSKGEGARGLKLILLHNSRYGKISSAR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0933 835 CDD PIN_Smg5-6-like 602 768 - -
Glsi12g0933 835 MobiDBLite consensus disorder prediction 507 525 - -
Glsi12g0933 835 Gene3D - 593 769 - -
Glsi12g0933 835 PANTHER TRANSMEMBRANE PROTEIN 18 446 825 - -
Glsi12g0933 835 MobiDBLite consensus disorder prediction 504 525 - -
Glsi12g0933 835 Pfam PIN domain 601 762 IPR002716 -
Glsi12g0933 835 Gene3D - 21 69 - -
Glsi12g0933 835 SUPERFAMILY SMAD/FHA domain 29 68 IPR008984 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0933 Glsi-ChrGlsi12 27055323 27059467 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g0933 12 27055323 27059467 Glsi12g0933 12 27055323 27059467 ECH