Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0904 ATGGGAGAGGAGGGAGAGAATTTAAGGGTTCAACCGGAAACAGTGGTTCGTGAAATGATGAGGGAGTTTCCTAATGTTGGCAACGATTTGAAACAGCTTTTGCAAATGATTGATGCTGGGCAAGCTGTTGACGTAAAGGGTATATCTGAAAGATCTCTCGTGAAACATCTGAAGAAGTTGTTCCTTTCATTAAATCTTAAGGAAAATGGAGATAGAGTTTTCCTTCTTCCTTCTAAAGTTCGCCCCACTTTGGATGTTGTTGGCTCTTTAATACACTCTTATATAGATCCCAAGAAGGAGCAAGCTTATCCTTCAGCAGTGACTGAAACCCCTTCAGTTCCAACAGGTAAGGAAAGTGAGCAGATGGCAGATGCCCATGACTTGGGAATTCCAGGGGATCATTCTGTTGGTCCTAGAAGAATGGTTGGTCCTTCAATGCCATCAGCTGAATTACTTGCTGCTGCTGCCAAATTAACAGAGGCACAAGCTGAGCTCAGAGAAGTTGAATTGGACGACAATACTGAAATATTCATAGGACCTCCCCCGCCTGCTATGGTTTCTGAAGCTGAAACAGCTAATGATGCAGAACGATTTGAAGAGGTCACAAGAATCATGGAAGCCGAGGCTGACAGCCCATATGACATTCTAGGAGCCAACCATAATATGTCCAGTGATAACATAAAGAAAAGGTACTGGAAGATGTCCCTTTTGGTTCACCCAGATAAATGCTCTCACCCTCAAGCTCACCAAGCTTTTATTAAGCTAAACAAAGCTTTCAAAGAGTTACAAGATCCTGAAAAGCGGAAAGCAATGGATGAAAAAATCAAACTCAAGCAAGAACAGGAGGAATTTAAGGCTGAGTTGAAAGCTATGCGTGAGGCTGCACTATGGAGAAGATCGCAAGGTATTTCCATGGAGGGTGATCATGTGCTTCTGGCAGAAACTGAGGTCAAAGTGCCACCAAAAAGAGATGAATGGATGACAACGCTGCCTCCAGAGAGGAAACCTGGTATGACTATGCAATCAACAAAGTTTAGCCGGGGCTCAAAGGAGGGTCGTGGTGATACTAGTGTTTGGACAGACGCTCCTTCAGACAGAGCCGAGAAAGCAAAGATGAATTATTTAGAAGCATACAATGAGGCTACTGCACTTGCCTCAAATGACGAGGAAAAGAAAAGGGCTAATGCAGATGCAGATTTGGTGGACAAATACAACAAAGCAAAACGGTCAAAATCATTGGTGCAAAAGCATCAAGATGAGGTTGCTAGCAAATCTAAGAAAAAATCTAAGCAACAGCCACAGAAGGAAGATTGGGTGGATCAACATCCCTGGAAACCTTGGGACCGTGAAAAGGATCTGACAGCTGGGAGGATGAACATAAAACTTGATTCAGATAGCATGGCCCAGGGATTATCATCAAGCTATATAGAACATTATTTTCTTCTAGCGGTGCTGAATATGTTCATGTGCCTCAACGCTGGAGAAATCTGTGTTGTTGTAATAGCTATTATACTATAG 1518 0.4295 MGEEGENLRVQPETVVREMMREFPNVGNDLKQLLQMIDAGQAVDVKGISERSLVKHLKKLFLSLNLKENGDRVFLLPSKVRPTLDVVGSLIHSYIDPKKEQAYPSAVTETPSVPTGKESEQMADAHDLGIPGDHSVGPRRMVGPSMPSAELLAAAAKLTEAQAELREVELDDNTEIFIGPPPPAMVSEAETANDAERFEEVTRIMEAEADSPYDILGANHNMSSDNIKKRYWKMSLLVHPDKCSHPQAHQAFIKLNKAFKELQDPEKRKAMDEKIKLKQEQEEFKAELKAMREAALWRRSQGISMEGDHVLLAETEVKVPPKRDEWMTTLPPERKPGMTMQSTKFSRGSKEGRGDTSVWTDAPSDRAEKAKMNYLEAYNEATALASNDEEKKRANADADLVDKYNKAKRSKSLVQKHQDEVASKSKKKSKQQPQKEDWVDQHPWKPWDREKDLTAGRMNIKLDSDSMAQGLSSSYIEHYFLLAVLNMFMCLNAGEICVVVIAIIL 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0904 505 CDD DnaJ 212 264 IPR001623 -
Glsi12g0904 505 MobiDBLite consensus disorder prediction 329 364 - -
Glsi12g0904 505 ProSiteProfiles dnaJ domain profile. 211 275 IPR001623 -
Glsi12g0904 505 SMART dnaj_3 210 267 IPR001623 -
Glsi12g0904 505 Gene3D DnaJ domain 196 295 IPR036869 -
Glsi12g0904 505 Coils Coil 151 171 - -
Glsi12g0904 505 Coils Coil 267 294 - -
Glsi12g0904 505 PRINTS DnaJ domain signature 231 246 IPR001623 -
Glsi12g0904 505 PRINTS DnaJ domain signature 247 267 IPR001623 -
Glsi12g0904 505 PRINTS DnaJ domain signature 213 231 IPR001623 -
Glsi12g0904 505 MobiDBLite consensus disorder prediction 407 446 - -
Glsi12g0904 505 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 9 475 - -
Glsi12g0904 505 Pfam DnaJ domain 212 272 IPR001623 -
Glsi12g0904 505 SUPERFAMILY Chaperone J-domain 195 269 IPR036869 -
Glsi12g0904 505 Pfam Protein of unknown function (DUF3752) 331 473 IPR022226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0904 Glsi-ChrGlsi12 26706710 26720886 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g0904 12 26706710 26720886 Glsi12g0904 12 26706710 26720886 ECH