Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0889 ATGAAGCACGTGCTAGGGTTTGCTGTTCTGTTGATCCATTTTTTGGTCTTGAATCCCCTATCGTTTTCTTCGGCTCAGCCATTCTCCGTTGATGGGACGGTGTTGCAATTGGATGAATCCAACTTCGATTCCGCCATATCGACCTTCGATCACATCTTGGTTGACTTTTACGCTCCATGGTGTGGTCACTGCAAGCGTCTCTCTCCCGAGCTAGATGCAGCTGCTCCTGTACTTGCAGCCTTGAAGGAACCCATAGTCATAGCAAAAGTAGATGCAGACAAGTTTACTGGTCTTGCCCAAAAATATGATGTTGATGCATATCCTACTCTTTTGGTGTTTATACATGGTGTACCCACTGAATACCGTGGACCAAGGAAAGCAGATTTACTAGTTCGTTATATGAAAAAGTTTGCTGCTCCGGATGTTTCCATTCTTGATTCAGATTCTGCTATCAGTAACTTTGTGGAAGAAGTTGGCACTTTTTTTCCCATATTTATAGGTTTTGGATTGGACAATTCTATAATAGAAAGGTTAGCCATAAAGTATAAGAAAAATGCATGGTTTTCTGTGGCAAAGGATTTTTCAGAGGATGTCATGGTATTGCATAATTTCGATAAGGTTCCTGCTTTGGTTTCTCTCAATCTGGGTTACAATGAGCGGAGCACTTTCTATGGCCCCTTTGATGAGGAGTTTTTGGAAGATTTCGTAAAACAAAACTTGATTCCTTTAGCTGTTCCTGTATCTCATGACACACTGAAGTTGATGAAAAGCGACGGGAGGAAAATTGCTTTGACAATTTTGGAGGATGAAGATGAAGAAAGATCAAAGGAACTAATTAAGCTATTGAAGGCTGCTGCGTCTGCAAATCGTGACTTAATATTCAGTTATGTTGGGGTTAAACAGTTGGATGAGTTTGCTGAAAAATTTGACATCAGTACGTTACCAAAAATGGTTATTTGGGATGGAAGTGATGAGTACCTCTCTGTTATTGGTTCAGAAAGCATTGATGGGGAGGACCAGGCAACTCAAATCACTAAATTACTAGAAGGGTACAGGGAAGGTAGAACCATACGGAAAGGACTTAGTGGCCCATCGCTATTGCGAGCGATCCATAAATCTTTTGACATCAGAACAGTGTACGTCTTCGTTTTTGTGATCGCAATTTTGATGCTTCTTCAGCTCTTAAATAAAGGAGGCGATGAATACCATAGAGTACCCAATCAAGACCAAGTTGATCATGCTAGCAGCTCTGTCTCAGAGACTGAAAGCAAAGAGTATAAACCTGGGGACAAGGATGACTAA 1302 0.4117 MKHVLGFAVLLIHFLVLNPLSFSSAQPFSVDGTVLQLDESNFDSAISTFDHILVDFYAPWCGHCKRLSPELDAAAPVLAALKEPIVIAKVDADKFTGLAQKYDVDAYPTLLVFIHGVPTEYRGPRKADLLVRYMKKFAAPDVSILDSDSAISNFVEEVGTFFPIFIGFGLDNSIIERLAIKYKKNAWFSVAKDFSEDVMVLHNFDKVPALVSLNLGYNERSTFYGPFDEEFLEDFVKQNLIPLAVPVSHDTLKLMKSDGRKIALTILEDEDEERSKELIKLLKAAASANRDLIFSYVGVKQLDEFAEKFDISTLPKMVIWDGSDEYLSVIGSESIDGEDQATQITKLLEGYREGRTIRKGLSGPSLLRAIHKSFDIRTVYVFVFVIAILMLLQLLNKGGDEYHRVPNQDQVDHASSSVSETESKEYKPGDKDD 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0889 433 ProSitePatterns Thioredoxin family active site. 53 71 IPR017937 -
Glsi12g0889 433 MobiDBLite consensus disorder prediction 418 433 - -
Glsi12g0889 433 ProSiteProfiles Thioredoxin domain profile. 14 139 IPR013766 -
Glsi12g0889 433 SUPERFAMILY Thioredoxin-like 254 353 IPR036249 -
Glsi12g0889 433 PANTHER PROTEIN DISULFIDE ISOMERASE 9 357 - -
Glsi12g0889 433 Pfam Thioredoxin 34 136 IPR013766 -
Glsi12g0889 433 Pfam Thioredoxin-like domain 190 329 - -
Glsi12g0889 433 FunFam Protein disulfide-isomerase 5-2 22 138 - -
Glsi12g0889 433 CDD PDI_a_family 35 134 - -
Glsi12g0889 433 Gene3D Glutaredoxin 23 148 - -
Glsi12g0889 433 Gene3D Glutaredoxin 230 363 - -
Glsi12g0889 433 PRINTS Thioredoxin family signature 103 114 - -
Glsi12g0889 433 PRINTS Thioredoxin family signature 60 69 - -
Glsi12g0889 433 PRINTS Thioredoxin family signature 52 60 - -
Glsi12g0889 433 MobiDBLite consensus disorder prediction 405 433 - -
Glsi12g0889 433 SUPERFAMILY Thioredoxin-like 26 137 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0889 Glsi-ChrGlsi12 26579099 26586963 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g0889 12 26579099 26586963 Glsi12g0889 12 26579099 26586963 ECH