Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0786 ATGTTAGAGATGTGCTTCCCTGGAATTAACTACATGGAAAGTAGTTATAGCTGTGAATTGTCCTGACCGCCTTCGACACGGACTATTTTCCGGGTCATCGTTTACGTCCTAGATGATTTGCCTCTCCGTTCGGTTTTGGTGTTTTTCCCCAATCGAACTTGGAAGGCGTACATTCAAGGCTTTCGGTATATCATAAAGCGTGGCAACAAGAAATCATCGAAATCGGAACTCCAGGAAATTGCTCTTGATGGGTATCGATCATTGGAGATCTTTGTGAACCATGCGTCTCGGACCGCCACCATTATGGCAAACCCCAATTCGGACCCAAATAACATGGTTCCGGCGGTGGTGCCTCCCAATTCCGCCGTAGTGGAATTACTACCTCCAGTGCGAGAAGTTGCTGTTTCAGAACGACCAAGTTTACTTCTTCGAAAAATTCAAGTTTGTTGCTTTGTGTGTGATTATTTAGACACGTTGAGTTTGGTTCGTGAAAAGGAAATCAAACGCCAAACACTTTATGAGCTAGTGGATATTATACAGTCTGGATCATTCAAATTCACCGAAGTTATGCAAGAAGAGCTTATTAGGATGGTTTCACTTAATATTTTCCGTTGTTTGCCCCCAGCATCCCACGAAAATACAGGGACTGAAAGTGTGGATCCCGAAGAAGACGACACATTTGTAAATCCATCATGGCCTCATTTGCAGCTTGTGTATGAAATTCTATTGAGGTACATTGTCTCATCTGAAACTGATACGAAGGTTGCCAAGCTCTACATTAATCATACATTTGTTTTAAAACTGCTTGATATGTTTGATTCGGAGGACCCGCGAGAGCGCGAGTATTTGAAGACCATTCTTCACCGCATATATGGCAAGTTCATGGTGCTTCGGCCTTTTATAAGGAAGGCGATCAATAATATATTTTATCGGTTTATATTTGAAACAGAGAGGCATAATGGTATACCTGAGCTGTTGGAGATCCTGGGTAGTATTATAAATGGTTTTGCATCGCCAATGAAAGAAGAACACAAGTTGTTTCTATTCCGAGCACTTATACCACTTCACAAGCCAAAATGTTTGTCTACGTATCATCAACAACTCACTTATTGCATCACTCAGTTTGTTGAGAAAGACTATAGGTTGGCGGATCCTGTGATCAGGGGGTTGTTGAAGTACTGGCCAGTCACAAATTGCCAGAAGCAGATCCTGTTCCTTGGAGAACTTGAAGAGGTTCTGGAGGCAACTCAGTCTACAGAATTTCGACAGTGCATGGTCTCTCTTTTCAGGCAGATTGGGCGCTGCCTTCACAGCCCACACTTCCAGGTTGCTGAACGAACACTTTACCTATGGAACAATGAGCACATAGTAAGTTTAATAGCTCAGAATCGAAATGTAATATTCCCACTAATCTTTGAAGCATTGGACAAGAACATGAAAGGCCATTGGAATCAAGCAGTGCATGGGCTGACAGCCAATGTGCAGAGGATGTTTCTGGAGATGGATGCCCAATTGTTTGAAGACTGCCAGAGTCAGTACTTGGAGAATATAGCCAGGGCCGTAGAACTGGAAGAGCAGCGAGAGTTGACATGGAAAAAGTTGGAAGCAGTGGCTGCACAAGCTGTGAGTGATCATAGGGTCTTGGTTAACTAG 1653 0.4325 MLEMCFPGINYMESSYSCELSXPPSTRTIFRVIVYVLDDLPLRSVLVFFPNRTWKAYIQGFRYIIKRGNKKSSKSELQEIALDGYRSLEIFVNHASRTATIMANPNSDPNNMVPAVVPPNSAVVELLPPVREVAVSERPSLLLRKIQVCCFVCDYLDTLSLVREKEIKRQTLYELVDIIQSGSFKFTEVMQEELIRMVSLNIFRCLPPASHENTGTESVDPEEDDTFVNPSWPHLQLVYEILLRYIVSSETDTKVAKLYINHTFVLKLLDMFDSEDPREREYLKTILHRIYGKFMVLRPFIRKAINNIFYRFIFETERHNGIPELLEILGSIINGFASPMKEEHKLFLFRALIPLHKPKCLSTYHQQLTYCITQFVEKDYRLADPVIRGLLKYWPVTNCQKQILFLGELEEVLEATQSTEFRQCMVSLFRQIGRCLHSPHFQVAERTLYLWNNEHIVSLIAQNRNVIFPLIFEALDKNMKGHWNQAVHGLTANVQRMFLEMDAQLFEDCQSQYLENIARAVELEEQRELTWKKLEAVAAQAVSDHRVLVN 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0786 550 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 107 541 IPR002554 GO:0000159|GO:0007165|GO:0019888
Glsi12g0786 550 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 127 538 IPR002554 GO:0000159|GO:0007165|GO:0019888
Glsi12g0786 550 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 134 537 - -
Glsi12g0786 550 SUPERFAMILY ARM repeat 139 533 IPR016024 -
Glsi12g0786 550 Gene3D - 135 537 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0786 Glsi-ChrGlsi12 25165549 25171160 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g0786 12 25165549 25171160 Glsi12g0786 12 25165549 25171160 ECH