Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0588 ATGGAGAGCCATGGCTCATCATTTTCAAGCTTCCGAGCCTACCTCCGCTCCCTTTCTCACACTCCCTCCCGGCTCCGTCGTCGAGCCATCTCCGTCTCCACTTCATACGAAGAGATGAGCCGGATTCGCGCCCGCTCCGGTTCTGACATGCGCAAGAGCCTCCGCTGGTTCGACTTGGTCGGACTCGGCATCGGTGGAATGGTCGGCGCCGGAGTCTTCGTCACCACCGGCCACGCCAGCCGTGTTTACGCCGGCCCTGCCATCGTGCTATCTTACGCCATTGCTGGCCTCTGTGCCCTCCTTTCCGCCTTCTGCTACACCGAGTTCGCTGTCGATATGCCAGTGGCTGGCGGTGCCTTCAGCTACCTCCGCGTCACGTTTGGGGAGTTTGCGGCATTTATAACTGGTGCGAACCTCGTCTTGGACTATGTGATGTCAAATGCTGCTGTTTCCAGAGGATTCACTGCCTACCTTGGCACTGCCATCGGCGTCTCCACCGATAAATGGAGGCTCACGGTTCCTTCTCTTCCCAAAGGGTTCAACGAGATCGATATCGTTGCGGTGGCTGTCGTTTTGCTCATCACCCTTGTTATCTGCTATAGCACGAGGGAGAGCTCAGTGGTGAACTTGATTTTGACGGCACTGCACATTTTGTTCATCGCATTTGTGATACTAATGGGTTTCTGGAGAGGGAGCTGGAAGAACTTCACGGATCCGGGTAACCCGGAAAACCCATCCGGGTTTTTCCCTTACGGAGCTTCGGGTGTGTTCCGTGGGGCAGCCATGGTTTATCTCAGTTACATCGGATACGACGCCGTTTCTACCATGGCTGAAGAAGTCCGAGACCCGGTCAAGGATATCCCCATCGGTGTATCAGGATCGGTCATCATCGTCACAATTTTCTACTGTCTCATGGCCGCTTCCATGTCCAAGCTCCTCCCTTACGATATGATCAATGCAGACGCGCCGTTTTCGGCGGCGTTCAGTGGGAAATCCGACGGCTGGGGATGGGTGTCGAAGGTGATAGGGGTGGGGGCCAGCTTCGGGATCCTAACGTCGTTGTTGGTGGCGATGTTGGGTCAGGCTCGGTACATGTGCGTGATCGGACGGTCCAACGTGGTCCCGGCTTGGTTCGCTAGGGTCCACCCCAAGACATCCACGCCTGTCAACGCCTCCGCTTTTCTTGGGATCCTAACAGCAGCGATCGCCCTTTTCACTGATCTCAATGTCCTTCTCAATCTTGTGTCCATTGGCACTCTCTTTGTCTTTTACATGGTGGCAAATGCTGTGGTGTATAGACGTTATGTGGCTGCTGGGACAACCAATCCATGGCCTACATTGTCCTTCCTTTGTTCATTATCCTTTACCTCACTCATGTTCACCCTTATTTGGAAATTCGTACCCACAGGACGGGCCAAGGCTGGGATGCTCAGTGCATGTGGTGTGATTGCCATTGCAATATTGAACATTTTCCATTGCATGGTCCCCCAAGCTCGGAAGCCAGAATTCTGGGGCGTACCACTCATGCCATGGATACCATCTGTATCAATATTTTTGAACGTGTTTCTGATGGGGTCACTCGATCGGGCATCCTATGTCCGATTCGGATACTTTTCGGCTGTCATAGTACTTGTCTATGTCTTTTACAGCGTGCATGCTAGCTTTGATGCCGAAGGAGATGGTACTCTCAGTCAAAAGAGTGGTGAAATTCATGTGGAATCAAAAGACAGTGAGGACCAAACTTTGAAAGTGTAG 1755 0.5293 MESHGSSFSSFRAYLRSLSHTPSRLRRRAISVSTSYEEMSRIRARSGSDMRKSLRWFDLVGLGIGGMVGAGVFVTTGHASRVYAGPAIVLSYAIAGLCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFITGANLVLDYVMSNAAVSRGFTAYLGTAIGVSTDKWRLTVPSLPKGFNEIDIVAVAVVLLITLVICYSTRESSVVNLILTALHILFIAFVILMGFWRGSWKNFTDPGNPENPSGFFPYGASGVFRGAAMVYLSYIGYDAVSTMAEEVRDPVKDIPIGVSGSVIIVTIFYCLMAASMSKLLPYDMINADAPFSAAFSGKSDGWGWVSKVIGVGASFGILTSLLVAMLGQARYMCVIGRSNVVPAWFARVHPKTSTPVNASAFLGILTAAIALFTDLNVLLNLVSIGTLFVFYMVANAVVYRRYVAAGTTNPWPTLSFLCSLSFTSLMFTLIWKFVPTGRAKAGMLSACGVIAIAILNIFHCMVPQARKPEFWGVPLMPWIPSVSIFLNVFLMGSLDRASYVRFGYFSAVIVLVYVFYSVHASFDAEGDGTLSQKSGEIHVESKDSEDQTLKV 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0588 584 PIRSF AA_transporter 475 566 - -
Glsi12g0588 584 PIRSF AA_transporter 36 494 - -
Glsi12g0588 584 Pfam Amino acid permease 54 485 IPR002293 GO:0016020|GO:0022857|GO:0055085
Glsi12g0588 584 Gene3D Amino acid/polyamine transporter I 49 473 - -
Glsi12g0588 584 Pfam C-terminus of AA_permease 504 554 IPR029485 -
Glsi12g0588 584 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 26 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0588 Glsi-ChrGlsi12 21284742 21288666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0588 141 583 Organic Solute Cotransporters AT3G10600 73.363 0.0 668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g0588 12 21284742 21288666 Glsi12g0588 12 21284742 21288666 ECH