Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g3091 ATGCTCGGATTGCTGCCGACGCTATCATTCCTCTTCTTAAGAACCAGGAATACCCATTATCTTGCACAAATTCAGCGTTTGATATATTTTGGTGGAACAACAAGAAGAGCAGCTGCAGAAGTCAAGATTAGAGTGAAAACCCCATTTCCTGTTCAATCCATGTCAGCCTCAACAAGTTCAAGGTCAAAAGCAGCACAAGTGCCTGCAGAGGATGAAGTGCAACAGGTTAAACTATTAGCATCAACCAATGATGACCATGGTGGAGTTATTGTGGAAATGGATGAGCCTATGGATTCTACAACCTTTATCTCAATTCTTCGAGCTTCAATTTCACACTGGAAACAGCTGGGAAAGAAGGGCATTTGGATAAAATTACCTATTCATCTAGTCAGTCTTGTTGAAGTTTTGGTTAAGGAAGGCTTTTGGTACCACCATGCAGAACCAAAATATTTAATGCTGGTGTACTGGATCCCTGAAAGTGCAAATACTATTCCAGCAAATGCCACGCACCGAGTGGGTGTTGGTGCATTTGTCATTAATGATAAACGAGAGGTCCTAGTGGTTCAAGAAAAAAGTGGACATTTTCAGGGAACTGGAGTCTGGAAGTTCCCAACCGGAGTTGTTGATCAGGGAGAAGATATTTGTTTAGCAGCAGGAAGAGAGGTCAAAGAAGAAACAGGAGTTGACACAGAATTCGTGGAAATATTAGCATTCAGACAAAGTCATAAGTCTTTCTTTGAGAAGTCAGATTTGTTCTTTGTGTGCATGTTGCGCCCAATTTCTTTTGACATCCAAATGCAGGAATCAGAGATAGCGGCTGCACAGTGGATGCCATTTGAGGAATATGCAGCTCAACCATTTGTCCAAAAGCGTCCACCTTTGAAGTACGTAAATGATGTATGCTTGGCAAAGATCAACGGACAATATTCTGGATTCTTACCTGTATCTACATCATCAAACTTTTCTGAGAAGAGCTATTTGTACGTGAATGCTGGGAGCCTGAAGAGGTGTAATTCTTTGTAA 1023 0.4145 MLGLLPTLSFLFLRTRNTHYLAQIQRLIYFGGTTRRAAAEVKIRVKTPFPVQSMSASTSSRSKAAQVPAEDEVQQVKLLASTNDDHGGVIVEMDEPMDSTTFISILRASISHWKQLGKKGIWIKLPIHLVSLVEVLVKEGFWYHHAEPKYLMLVYWIPESANTIPANATHRVGVGAFVINDKREVLVVQEKSGHFQGTGVWKFPTGVVDQGEDICLAAGREVKEETGVDTEFVEILAFRQSHKSFFEKSDLFFVCMLRPISFDIQMQESEIAAAQWMPFEEYAAQPFVQKRPPLKYVNDVCLAKINGQYSGFLPVSTSSNFSEKSYLYVNAGSLKRCNSL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g3091 340 ProSitePatterns Nudix box signature. 206 227 IPR020084 GO:0016787
Glsi11g3091 340 Gene3D - 76 161 - -
Glsi11g3091 340 ProSiteProfiles Nudix hydrolase domain profile. 169 301 IPR000086 -
Glsi11g3091 340 PANTHER NUDIX HYDROLASE RELATED 52 334 IPR003293 -
Glsi11g3091 340 CDD Nudix_Hydrolase_12 170 290 - -
Glsi11g3091 340 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 129 147 IPR003293 -
Glsi11g3091 340 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 151 167 IPR003293 -
Glsi11g3091 340 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 167 185 IPR003293 -
Glsi11g3091 340 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 255 279 IPR003293 -
Glsi11g3091 340 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 171 302 - -
Glsi11g3091 340 FunFam Nudix hydrolase 8 171 309 - -
Glsi11g3091 340 Pfam Nudix hydrolase domain 79 157 IPR040618 -
Glsi11g3091 340 SUPERFAMILY Nudix 137 297 IPR015797 -
Glsi11g3091 340 FunFam nudix hydrolase 2 76 162 - -
Glsi11g3091 340 Pfam NUDIX domain 170 292 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g3091 Glsi-ChrGlsi11 28150031 28155409 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g3091 11 28150031 28155409 Glsi11g3091 11 28150031 28155409 ECH