Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2639 ATGGCATCTCTCCATTTCTCCTATTCTTCAACAGCAGCTCTCTCGCTCCCACGGGCACGCAAACACTTAAACTCATTCACTGGATTGCAATGTATGAATTCATTTCTTGTACATGGACGTAGATTTGATTTGGCATTTGTACGACTGGATTCTAAATTCTCCTCAAGTGACAAGGGTGTTAGTAGAACCAAAGCAACACTGATGTCTGGAGGAGGTGACCTTGTTTTTAATTCAAATGGAAATGGTGTCATGACCAGTAAAGATCTGGTAGATGATGAATCAGTTAGAATTAAGATACAACCTGAAGTAATAGCAAATAGAACACTAGCAGCAGAGACAGCGGCAACAAGCAATGGTTTTCCTGTTGACAATGATGAGTTTGATTCAGACAGCCCCACAGAAGGTTTTGCTTCCATTCCTGAGGCCATTGAGGATATTCGCCAGGGAAAGATGGTATTGGTTGTAGATGATGAGGACAGAGAAAATGAAGGAGACTTAATAATGGCTGCACAGTTGGCAACACCTGAGGCTATGGCTTTTATTGTGAAGCATGGAACTGGGATAGTTTGTGTAAGCATGAAAGGGGAAGATCTGGAGAGATTGGAACTTCCTTTGATGGTAGACAGTAAGGATAATGATGAGAAACTTCGTACGGCATTCACAGTGACAGTGGATGCTAAACGTGGTACCACGACGGGGGTGTCAGCTAGTGATAGGGCAACAACAGTCTTGGCTCTTGCATCCAGAGATTCAACACCAGCTGATTTCAATCGCCCAGGCCATATTTTTCCATTAAAATACAGGGAAGGTGGTGTCTTGAAGAGAGCTGGACATACAGAAGCTTCAGTTGATCTTGCGATACTTGCTGGTTTGGAACCTGTGGCAGTACTATGTGAGGTTGTAGATGATGATGGTTCCATGGCTAGATTGCCGAAGCTTCGCCAGTTTGCAGAGCGTGAAAACTTGAAAATTGTTTCTATTGCTGATTTAATAAGATATAGAAGGAAGAGAGATAAATTAGTAGATCGTGCTGGGGCTGCACAAATACCTACAGTGTGGGGGCCATTTGCAGCTTACTGCTATAGATCGCTTTTAGATGGGATTGAACATATCGCAATGGTTAAGGGTGACATTGGAGATGGACGAGATGTTCTAGTGAGGGTACACTCCGAGTGTCTTACTGGAGACATATTTGGATCTGCCCGATGTGACTGCGGGAATCAGCTTGCACTTGCAATGCAGCAGATTGAGGCTGCTGGTAGGGGTGTGCTGATATATCTCCGTGGACACGAAGGAAGAGGTATTGGACTAGGCCACAAGCTTCGTGCTTATAACCTACAGGATGATGGACGAGATACTGTAGAAGCCAATGAGGAGTTAGGACTGCCTGTTGACTCAAGGGAATATGGCATTGGTGCACAGATATTAAGGGACTTAGGTGTTCGGTCTATGAAGCTGATGACGAACAATCCAGCAAAATATGTTGGGCTCAAAGGTTATGGTTTGACCATTTCTGGTAGGATCCCATTGGTAACTCTTATCACAAAGGAGAACAAGAGATACTTGGAGACAAAACGGGCGAAAATGGGCCACGTTTACGGCATGGAATTTACTGGTCAACTGAGCAGTTATGACAGTGGCAATGGTAAAGCTAGTGTCGATGATTCCAATGCTGTTACTGGTTCATGA 1689 0.4417 MASLHFSYSSTAALSLPRARKHLNSFTGLQCMNSFLVHGRRFDLAFVRLDSKFSSSDKGVSRTKATLMSGGGDLVFNSNGNGVMTSKDLVDDESVRIKIQPEVIANRTLAAETAATSNGFPVDNDEFDSDSPTEGFASIPEAIEDIRQGKMVLVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLELPLMVDSKDNDEKLRTAFTVTVDAKRGTTTGVSASDRATTVLALASRDSTPADFNRPGHIFPLKYREGGVLKRAGHTEASVDLAILAGLEPVAVLCEVVDDDGSMARLPKLRQFAERENLKIVSIADLIRYRRKRDKLVDRAGAAQIPTVWGPFAAYCYRSLLDGIEHIAMVKGDIGDGRDVLVRVHSECLTGDIFGSARCDCGNQLALAMQQIEAAGRGVLIYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRSMKLMTNNPAKYVGLKGYGLTISGRIPLVTLITKENKRYLETKRAKMGHVYGMEFTGQLSSYDSGNGKASVDDSNAVTGS 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2639 562 Hamap 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 134 338 IPR000422 GO:0008686|GO:0009231
Glsi11g2639 562 Hamap GTP cyclohydrolase-2 [ribA]. 339 535 IPR000926 GO:0003935|GO:0009231
Glsi11g2639 562 Pfam GTP cyclohydrolase II 346 509 IPR032677 -
Glsi11g2639 562 NCBIfam 3,4-dihydroxy-2-butanone-4-phosphate synthase 137 334 IPR000422 GO:0008686|GO:0009231
Glsi11g2639 562 FunFam Riboflavin biosynthesis protein RibBA 341 512 - -
Glsi11g2639 562 Gene3D GTP cyclohydrolase II 341 512 IPR036144 -
Glsi11g2639 562 CDD GTP_cyclohydro2 340 531 IPR000926 GO:0003935|GO:0009231
Glsi11g2639 562 SUPERFAMILY RibA-like 339 510 IPR036144 -
Glsi11g2639 562 SUPERFAMILY YrdC/RibB 135 337 IPR017945 -
Glsi11g2639 562 PANTHER GTP CYCLOHYDROLASE II-RELATED 134 534 - -
Glsi11g2639 562 Hamap Riboflavin biosynthesis protein RibBA [ribBA]. 135 531 IPR016299 GO:0009231
Glsi11g2639 562 FunFam Bifunctional riboflavin biosynthesis protein RIBA 1 chloroplastic 127 340 - -
Glsi11g2639 562 Gene3D DHBP synthase 124 340 - -
Glsi11g2639 562 NCBIfam GTP cyclohydrolase II 346 532 IPR000926 GO:0003935|GO:0009231
Glsi11g2639 562 Pfam 3,4-dihydroxy-2-butanone 4-phosphate synthase 141 333 IPR000422 GO:0008686|GO:0009231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2639 Glsi-ChrGlsi11 19165241 19170214 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2639 11 19165241 19170214 Glsi11g2639 11 19165241 19170214 ECH