Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2569 ATGGAACTAGCTAATCATAGAGTAATGGCGAATGGGGAGGCTGAGGGGATGGACGGTGAATCTTCTGTAGACATGCCTCTAACGGAGAGCCGAATCTACCCGTCCCATCCTGCTGGCTTGGTGAAGAAGAGAGCCTATATATTTGATGGCATGGGGAATTTTTACAATAAGGAGTGGGATCTAGCAGAATTTTATCAAAAGGAGAAAAAGGAATTGGATCTAGCAGAAGGAGGAGGGAATGAATTTTCTTGGTACCACGTGGAACTCCCAAAAGGAAATCAAAAGTTGTCACAGTCTGCACAGGACCTAATTGGTATTCTTTGCCCACCTTTGAAACTCCAGGACATTCTTGCACTTGTCAGCAATGGACCCTTTTGTGCACATGTTGATGGGGCACTTGTATTCAGAGTTAATTCACCAGGTCCTCCCTCCAGTGACTTTACATTTAGAATTGCTGCTCGAGTTACAGAAAACTCAGTGATTACTGTGTCTCTGGGGCGTGTTCCAAGATTGGGCTTCTCACGAATGGGAGAGTCACTTCTTTCTGAGATTCCTAGTGTGGAAAGACCCCCTCATTTAAGAGGTCAGCAGAAGGAAGGGAGTGGAATTGTGATTAGGGAGCATGTTCTTGAATTCTTATTGACTATGAACCACTCTGAGGAAGCTGACAATCCTGTGCCTAGATCTGTTTCAAATCTTATAGTTCATATAATTGATACACATGTAGATCAGCTTCAAGATCTTGTAACTAAACTTGAGATGGAGTTGGACTCCGTGGAGCTTGAATTGGATAAAGGTGGTTTTGCTTTGAAGAAACAAATGCTAGATGATAGAAGATTCCCCAAACTGCATCTTAATTTGCAGCGTCTCATGCAGGTAACTTCTCATGGAGAGCAAATATTCCTACGAGTCAAAGAAAAATGCTCTTCGAAACGATGGTTTGCCAATGAAGACATTAACTCTCTTGAAGAATTAATTGGAAGGTTAAGGAGGTTGAAGGAAAACGTAGGATTTATAGTAAATCGCGTCACAGCAATTCAGGCTGGTCTTGACAGCTGGCAGGCAGAACAAATAAATAGGAAACTCTACTATCTTTCATTCCTTTCAATTATATTCCTTCCATTATCCATCATAACGGGAGTTTTTGGCATGAATGTTGGAGGAGTTCCATGGACAGGCCAAAATAATCCAGAGCTCAGGGATGGTTTTCGCAATGTGATGCTACTCTGTGGGTCTTTGCTATTTGTTGTACTACTCTGTTACTTCCTTTTCCCGGCTCTTTATAACCGTATAGCTGCTTGGCAAAAAAAGAGTGGTCTCGGGCGAAGCTGGTCGCTCAATAGCAAGTCATTGCTCAGGAGACCTCTACGCATAGGAGACGAAGGGAGAGAGGGTTACCTTCGAATTTAA 1410 0.4284 MELANHRVMANGEAEGMDGESSVDMPLTESRIYPSHPAGLVKKRAYIFDGMGNFYNKEWDLAEFYQKEKKELDLAEGGGNEFSWYHVELPKGNQKLSQSAQDLIGILCPPLKLQDILALVSNGPFCAHVDGALVFRVNSPGPPSSDFTFRIAARVTENSVITVSLGRVPRLGFSRMGESLLSEIPSVERPPHLRGQQKEGSGIVIREHVLEFLLTMNHSEEADNPVPRSVSNLIVHIIDTHVDQLQDLVTKLEMELDSVELELDKGGFALKKQMLDDRRFPKLHLNLQRLMQVTSHGEQIFLRVKEKCSSKRWFANEDINSLEELIGRLRRLKENVGFIVNRVTAIQAGLDSWQAEQINRKLYYLSFLSIIFLPLSIITGVFGMNVGGVPWTGQNNPELRDGFRNVMLLCGSLLFVVLLCYFLFPALYNRIAAWQKKSGLGRSWSLNSKSLLRRPLRIGDEGREGYLRI 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2569 469 Coils Coil 242 262 - -
Glsi11g2569 469 SUPERFAMILY CorA soluble domain-like 73 347 IPR045861 -
Glsi11g2569 469 Coils Coil 315 335 - -
Glsi11g2569 469 MobiDBLite consensus disorder prediction 1 23 - -
Glsi11g2569 469 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 357 418 IPR045863 -
Glsi11g2569 469 Pfam CorA-like Mg2+ transporter protein 217 424 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Glsi11g2569 469 PANTHER OS08G0130000 PROTEIN 1 469 - -
Glsi11g2569 469 Gene3D Magnesium transport protein CorA, transmembrane region 227 353 - -
Glsi11g2569 469 Gene3D Magnesium transport protein CorA, transmembrane region 354 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2569 Glsi-ChrGlsi11 18231855 18234606 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2569 11 18231855 18234606 Glsi11g2569 11 18231855 18234606 ECH