Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2557 ATGCAAATCGTATTTCAGAAGTTTTTTGCTCCGCTCTTTCTGAAGTTCTGTTTAAACAACTGCTACTTCACAAAGCAAAGGCTTGTGCTTCTGCAGCTGAAGATGGGGAAAAAGCGTGCGATGTTGCCAGTGGAACACGTTGACTTATCCACAGTCAAATATGAACCTGAACTTATCCAAGCTCCACACTTGACTGGATTTGTGTTTAGATTATTTGTTCGAATAGTTGAAGCCCCGTTGATAGGGCCCTTTATAATAAGTTTATTGAAGAAGCAGAATAAGGTTAACGAGTTGTTGCGGAACACTGTGATACCCGAGGAACCCATGTTCAAACCTGAATATCCACCTCAAGAAATGGAACCTGGTGTTGTCATCCTTGATGAAGATGGGAGACCTGAAGACCGAGTTGAATCTGCCTTGAATTGTCTTCCGCATTATGATCCTGCTGCATATTGGGGAAATTCATCTACGCCCTTCCGGTACTGGAAAATTCGTGATTATGCTTATGCTTATCGATCGGGAAATGTAACTCCATCTATGGTTGCAGAGCACATCATCTCAGTTATAGAGGAGATTAATAATAAGAAACCACCGGCACCACTACTGATTTCCTTTGATGCTGAAGAAGTCAGGAATCAGGCAGCAGCATCTACTCAGAGATTTGAAGCAGGAAACCCATTATCAATTTTAGATGGAATTTTCATGGCCATCAAGGATGACATAGACTGCTACCCCCATCCATCTAAGGGTGCTACTACATGGATACATGAGGTACGCTCTGTTAAAAAGGATGCTGTTTGTGTTTCAAGGCTACGTAGCTGTGGTGTCATATTTGTAGGGAAGGCAAATATGCATGAGTTAGGCATGGGAACAACAGGAAATAATTCTAATTATGGAACGACAAGAAATCCCCATGCACCTGACAGGTATACTGGTGGATCTTCTTCCGGTCCTGCTGCTATTGTAGCTTCTGGACTGTGTTCTGCTGCACTGGGAACTGATGGTGGAGGTTCAGTTCGCATTCCTTCTTCCCTTTGTGGTGTAGTGGGATTAAAGACAACATATGGACGGACAGACATGCAAGGGTCATTATGTGATTCTGGGACAGTGGAAATTATTGGACCCATTGCTTCAACAGTGGAGGATGTCATGCTAGTGTATGCAGCAATGTTGGGTTCATCACCTGCAACCAGAATCAGTATGAAACTGTCACCACCTTGTTTGCCAAACCTGTCATCCTATGATGATTCAAATGCTTTGGGATCATTACGACTAGGAAAGTACACCCCGTGGTTTAATGATGTGCATTCAACAGAAGTCTCTGATAATTGTGAGGATGCTCTCAATCTGCTGTTAAAATACCATGGTTGTGAAATGATAGAGATTGTTATACCAGAGCTTCATGAGATGCAAACTGCCCATGTTGTTTCCATTGGCTCTGAATGCCAATATTCACTGAGTCCTGATTGTGAGGACGGAAAAGGTCCAAAATTGACATATGATACTCGTACAAATCTGGCACTTTTTCGATCATTTACAGCAGCAGATTATGTGGCTGCCCAATGTCTCAGACGAAGGCTCATGTATTACCACATGGAGATTTTCAAGAAAGTGGATGTCATAGTGACTCCAACAACTGGCATGACAGCACCAAAAATACCTCCTAGTGCTCTCAAAAGTGGTGAGACAGATATGCAGGTTACAGGTTACCTTATGCGGTTTGTTGTTGCAGCAAATCTACTTGGTTTCCCTGCCATTTCTGTCCCGGTTGGTTACGATAAAGAAGGGCTTCCAATAGGTTTGCAACTAATCGGTCGGCCATGGGGGGAAGCTACAATTCTGCGTCTAGCTTCTGCAGTGGAGAAAATCTGCGGTGAGTCAAAGAAAAAACCTGTATCATACTATGATGTTCTGAGGGCAAGCTGA 1926 0.432 MQIVFQKFFAPLFLKFCLNNCYFTKQRLVLLQLKMGKKRAMLPVEHVDLSTVKYEPELIQAPHLTGFVFRLFVRIVEAPLIGPFIISLLKKQNKVNELLRNTVIPEEPMFKPEYPPQEMEPGVVILDEDGRPEDRVESALNCLPHYDPAAYWGNSSTPFRYWKIRDYAYAYRSGNVTPSMVAEHIISVIEEINNKKPPAPLLISFDAEEVRNQAAASTQRFEAGNPLSILDGIFMAIKDDIDCYPHPSKGATTWIHEVRSVKKDAVCVSRLRSCGVIFVGKANMHELGMGTTGNNSNYGTTRNPHAPDRYTGGSSSGPAAIVASGLCSAALGTDGGGSVRIPSSLCGVVGLKTTYGRTDMQGSLCDSGTVEIIGPIASTVEDVMLVYAAMLGSSPATRISMKLSPPCLPNLSSYDDSNALGSLRLGKYTPWFNDVHSTEVSDNCEDALNLLLKYHGCEMIEIVIPELHEMQTAHVVSIGSECQYSLSPDCEDGKGPKLTYDTRTNLALFRSFTAADYVAAQCLRRRLMYYHMEIFKKVDVIVTPTTGMTAPKIPPSALKSGETDMQVTGYLMRFVVAANLLGFPAISVPVGYDKEGLPIGLQLIGRPWGEATILRLASAVEKICGESKKKPVSYYDVLRAS 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2557 641 SUPERFAMILY Amidase signature (AS) enzymes 159 627 IPR036928 -
Glsi11g2557 641 ProSitePatterns Amidases signature. 312 343 IPR020556 -
Glsi11g2557 641 Pfam Amidase 192 614 IPR023631 -
Glsi11g2557 641 Gene3D Amidase signature (AS) domain 164 624 IPR036928 -
Glsi11g2557 641 PANTHER TRANSAMIDASE 155 637 IPR000120 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2557 Glsi-ChrGlsi11 18158535 18168035 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2557 35 641 Acyl Lipid Metabolism Gene Families AT5G64440 68.421 0.0 870
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2557 11 18158535 18168035 Glsi11g2557 11 18158535 18168035 ECH