Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2514 ATGGCGTCGAAGAATGGAATGGTGTTCGAGGATTACTTCCCGGCAATGGTGGAGAAACTGGGGACGAATGGGTTCATGAAGGAGTTGAGAAATGGGTTTCAGTTGCTGATGGACAGAGAGAAGGGGGTGATCACGTTCGAGAGCTTGAAGAGAAACTCTGCTTCGCTTGGGTTGCAGGGGATGAGCGATGAGGAGATAATGTGCATGCTGGGAGAAGGAGATTTGGACGGGGATGGAGCTCTGGACGAGATGGAGTTTTGCACCCTTATGTTTAGATTGAGCCCTGATTTGATGAAAAATTCTAAGGAACTCTTGGAGGAAGCCATTTTTAGTGAACTTTAA 342 0.4737 MASKNGMVFEDYFPAMVEKLGTNGFMKELRNGFQLLMDREKGVITFESLKRNSASLGLQGMSDEEIMCMLGEGDLDGDGALDEMEFCTLMFRLSPDLMKNSKELLEEAIFSEL 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2514 113 SUPERFAMILY EF-hand 24 99 IPR011992 -
Glsi11g2514 113 ProSitePatterns EF-hand calcium-binding domain. 74 86 IPR018247 -
Glsi11g2514 113 Pfam EF-hand domain pair 40 92 IPR002048 GO:0005509
Glsi11g2514 113 PANTHER CALCIUM-BINDING PROTEIN KIC 7 112 IPR044205 GO:0005509
Glsi11g2514 113 Gene3D - 7 113 - -
Glsi11g2514 113 ProSiteProfiles EF-hand calcium-binding domain profile. 61 96 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2514 Glsi-ChrGlsi11 17805091 17805432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2514 9 113 EF-hand Containing Proteins AT4G27280 60.377 7.47e-40 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2514 11 17805091 17805432 Glsi11g2514 11 17805091 17805432 ECH