Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2462 ATGGATGAGATCATGGTTGAATATGCTTCACGTCATGCAGGAGCAGATATATATTTGAGAAGGAAGAAGATCGATGTTTGCAAAACATCATTTTCATTGGAGGAGCCACAGAAGCACCACCACTACAAATTCTTCAAGTTATGGGTTATTAATCCCCGTTCATTTTGCTTTCTTATTCTCAACGTCACAAAACCAATATCCATAATATTAGAACAAATTGACATGTCTCTACATTGTTCTGGCTCGAGTACAAAAATCCCACGTTTCCTGGGACAGTGGAGAAGAAATAGCGGCTTCACACTCGGGCATGTAGGAGCACCAAGCTCCTGCTTTTTCTTCTCCTTCCATTATAAATTCCCCGAGAACCTTTCTAGGCACATTGGGTTTGTGTCAAAATTCGACCAAGCTTATTCTTCTCCACTGATGGAAGAGGGCCAGAAAAGCGTGGGTTTTGCCCCAGAAGAACCAGAGGAATATTCCAAAGAATTGGATGTTGCTGTCAGAGCAGTACAGATGGCATGCTCCGTCTGCCAGAAAGTGCAAGAAAATTTGATTGTTAAGTCCAAGAGCGACGACAATCAGGTCCAATCCAAGGACGACAATTCCCCAGTCACAATTGCTGATTGGAGTGTCCAAGCAATTGTCAGCTGGATATTGTCTGAGTGCTTAGGAAGTAAAAACATCTCAATTCTAGCTGAAGAAGATGTTCAAACTCTCTCCAAGACTAATGCATCTGGAGTGTTAGAAGCTGTGGTTAAAACTGTGAATGAATGTCTCACTGAGGCACCTCGATTTGGGGTTGAACCGCCAAAATCAGCTTTAGGTGCATCAGAGGTTCTTGAAATCATTAGCCACTGCAACTCAGTTGGGGGTCCTAGGGGAAGATTTTGGGTACTTGATCCTGTTGATGGCACATTGGGGTTTGTACGTGGAGATCAATATGCTGTAGCTCTTGCACTCATAGAGGACGGAGAAGTAGTGCTTGGAGTTCTTGGGTGTCCTAACTACCCAATGAGAAAGGAATGGTTAACCTATCATCACCGCTATCATAGGATTATATCTAAGTTGACCCCTCCTACATCTGAAACTTGGAACAAGGGTTGTGTGCTATATGCTAAAAGGGGTAGTGGCAGGGCATGGATGCAACCACTGCTCCAGGTCAATAAGAAGTTTGTGTGGCCTAACTATGCAAGACAAGTTTCTGTTTCTACCATTGACAATCCAACACTGGCTACTTTTTGTGAACCTGTTGAGAAGGCTAATTCAAGCCACTCTTTCACTGCAGGGCTGGCTCATAGTGTTGGTCTCAGGAAGCAACCATTAAGAGTATACAGCATGGTGAAATATGCAACAATAGCTCGTGGGGATGCAGAGGTTTTCATGAAGTTTCCTAGGTCTGGTTACAAGGAGAAGATATGGGATCATGCTGCTGGTGTGATCATCATACAGGAGGCTGGTGGTGTGGTAACAGATGCCAGAGGGCGTCCACTAGACTTCTCAAAAGGTTTATATTTAGAAGGTCTTGATCGTGGTATAGTTGCTTGTTCTGGAGCCAGACTTCATGAAAAGATCATAGATGCTGTTGATGCTAGCTGGGGCTCTTCTAGCCTTTGA 1614 0.4393 MDEIMVEYASRHAGADIYLRRKKIDVCKTSFSLEEPQKHHHYKFFKLWVINPRSFCFLILNVTKPISIILEQIDMSLHCSGSSTKIPRFLGQWRRNSGFTLGHVGAPSSCFFFSFHYKFPENLSRHIGFVSKFDQAYSSPLMEEGQKSVGFAPEEPEEYSKELDVAVRAVQMACSVCQKVQENLIVKSKSDDNQVQSKDDNSPVTIADWSVQAIVSWILSECLGSKNISILAEEDVQTLSKTNASGVLEAVVKTVNECLTEAPRFGVEPPKSALGASEVLEIISHCNSVGGPRGRFWVLDPVDGTLGFVRGDQYAVALALIEDGEVVLGVLGCPNYPMRKEWLTYHHRYHRIISKLTPPTSETWNKGCVLYAKRGSGRAWMQPLLQVNKKFVWPNYARQVSVSTIDNPTLATFCEPVEKANSSHSFTAGLAHSVGLRKQPLRVYSMVKYATIARGDAEVFMKFPRSGYKEKIWDHAAGVIIIQEAGGVVTDARGRPLDFSKGLYLEGLDRGIVACSGARLHEKIIDAVDASWGSSSL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2462 537 ProSitePatterns Inositol monophosphatase family signature 2. 473 487 IPR020550 GO:0046854
Glsi11g2462 537 Gene3D - 401 531 - -
Glsi11g2462 537 CDD PAP_phosphatase 162 528 - -
Glsi11g2462 537 PANTHER PHOSPHATASE 150 535 - -
Glsi11g2462 537 ProSitePatterns Inositol monophosphatase family signature 1. 297 310 IPR020583 -
Glsi11g2462 537 Pfam Inositol monophosphatase family 200 531 IPR000760 -
Glsi11g2462 537 FunFam PAP-specific phosphatase HAL2-like 157 390 - -
Glsi11g2462 537 SUPERFAMILY Carbohydrate phosphatase 159 530 - -
Glsi11g2462 537 Gene3D - 157 391 - -
Glsi11g2462 537 FunFam PAP-specific phosphatase HAL2-like 401 534 - -
Glsi11g2462 537 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 159 536 IPR006239 GO:0006790|GO:0008441
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2462 Glsi-ChrGlsi11 17389108 17395525 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2462 11 17389108 17395525 Glsi11g2462 11 17389108 17395525 CCT
Glsi11g2462 11 17389108 17395525 Glsi11g2462 11 17389108 17395525 ECH