Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1360 ATGTCTAGCTCTACAAAAGTTTTGGATCCTGCATTCCAGGCAGTGGGTCAAAAAGTAGGGACTGAAATTTGGAGGATTGAGAATTTTCAACCAGTTCTGTTACCCAAATCTGAATATGGGAAATTCTACACAGGAGATTCATACATTATCTTGCAGACAACACAAGGCAAAGGAGGTGCTTATTTTTATGACATACACTTCTGGATTGGAAAGGATACAAGTCAGGATGAGGCCGGAACGGCAGCCATCAAAACTGTTGAACTTGATGCAGCTCTTGGAGGTCGGGCAGTGCAGCACAGGGAAATCCAAGGCCACGAATCTGACAAATTTTTGTCATACTTTAAACCATGCATAATACCATTAGAGGGAGGTGTCGCATCTGGATTTAGAAAACCTGAAGAGGAACAGTTCGAAACACGGTTGTACATATGCAAAGGAAAGCGAGTTGTCCCTTTTGCACGGTCTTCACTGAATCATGATGATGTATTTATCCTAGACACTCAAAATAAGATTTATCAATTCAATGGGGCAAATTCAAATATTCAGGAGAGAGCCAAGGCTTTGGAAGTAATTCAGTTTTTGAAGGAAAAGTATCATGAAGGGAAATGTGACATTGCAATTGTTGATGATGGCAAGTTGGACACTGAGTCAGATTCAGGTGAATTTTGGGTCCTCTTCGGTGGTTTTGCTCCCATTGGAAAGAAGGTTATCAATGAGGATGATATCATTCCAGAGGCCACTCCTGCTCAACTTTATTGTATTATTGATGGTGAGGTCAATCCTGTGGAAGGTGAATTGTCTAAATCGCTGTTGGAGAATAACAAATGCTATTTACTGGACTGTGGTGCTGAGGTATTTATCTGGGTTGGCCGGGTAACACAAGTTGAAGAAAGAAAAGCAGCATGCCAAGCTGCTGAGGAGTTTGTTGCAAGTCAAAATAGGCCAAAATCTACACGGATAACAAGAATTATTCAAGGTTATGAGACACATTCGTTCAAGTCCAACTTTGATTCTTGGCCATCGGGATCTGCTGCTACCGGTGCTGAGGAAGGGAGAGGCAAAGTTGCAGCTTTGCTGAAGCAACAAGGTATGGGTGTCAAGGGAATGACAAAAAATACTCCAGTCAATGAGGAAATTCCACCTCTGCTTGAAGGGGGTGGAAAGATGGAGGTATGGCTGATCAATGGAAGTGCCAAGAATCCATTACCCAAAGAAGACATTGGTAAATTTTACAGTGGAGATTGTTACATAGTATTGTACACTTACCACTCTGGTGAGAGGAAGGAAGACTACTTTTTGTGTTGTTGGTTTGGAAAAGACAGCTTTGAGGAGGACCAAAGGATGGCCACTCGGTTGGCCAGTACAATGTTCAACTCACTAAAGGGTAGACCTGTTCAGGGCCGTATATTTGAAGGTAAAGAGCCACCACAATTTATTGCTCTTTTTCAGCCTATGGTGGTCCTTAAGGGAGGCTTGAGCTCTGGTTATAAAAAATTTATAACAGAGAAAGGTTTGCCAAACGAGACATACACAGCAGAATGTATTGCACTTATCCGAATTTCTGGAACTTCCATTCATAATAATAAAGCAGTCCAAGTTGATGCATTGGCAACGTCATTAAATTCTACCGAGTGTTTCCTTCTGCAATCTGGCTCATCAGTTTTTACTTGGCATGGAAGTCAATGTTCTTTTGAGCAGCAGCAGCTAGCGGCAAAAGTTGCTGAATTTTTGAAGCCAGGAGTTTCATTAAAACATGCTAAAGAAGGAACAGAAAGCTCAGCTTTCTGGTTTGCACTTGGAGGAAAACACGGTTACAACAGCAAAAAAGCCTCTAATGACATTGTCAGAGATCCACATTTGTTCTCATTTTCATTAAATAAAGAAGAGGTTTACAACTTTTCCCAAGATGATCTGTTGACTGAGGATATCCTTATACTTGACACACATGCCGAAGTGTTTGTTTGGGTTGGCCAGTCTGCGGACTCAAAAGAAAAGCAAAACGTTTTTGAAATTGTCCAGAAATATATAGACATGGCTGCATCTCTGGAGGGATTGTCTCCGCATGTACCACTATATAAAGTCACAGAAGGGAACGAACCTTGCTTCTTCACAACATACTTTTCATGGGATCATTTAAAAGCTACTGTTCAAGGAAACTCATTCCAGAAAAAGGTGTCATTACTCTTTGGTATTGGCCATGCTGTGGAGGATAAGTCCAATGGATCAAGTCAAGGAGGACCAAGACAAAGAGCAGAAGCTTTAGCTGCCTTATCTTCTGCATTCAGTTCATCCTCTGAGAAAACATCTAGTACGGCACAGGATAGGCTGAATGGACTAAATCAAGGAGGACCAAGACAAAGAGCAGAAGCTTTAGCTGCATTAAACTCTGCATTTAATTCATCATCTGGAAGCAAAACTGTTGTTTCTAGGCCTTCTGGTACAAGTCAAGGATCACAAAGAGCAGCAGCAGTAGCTGCTCTTTCAAATGTTCTTACTGCTGAAAAGAAGAAGCATTCGCCTGATGCGTCTCCTCCTGGGGCGAGCAGTAGTCCTGTTGCAGAAAGTAGCACTTCTGAAGCTAAAAGTGAAAGTGGCCATTCTGAGACAGAAGGCCCTGAAGAAGTTGCAGAAGCCAAGGAGACAGAGGGAGTTGCACCTGAAGCTGGTAGCAATGGGGATTTAGAACCAAAACAAGAAAATGTTGAGGATGGGAATGATAGTCAAATTAGTCAGAGCACGTTCAGTTATGATCAATTAAAGACTAAATCTGATAAACCTGTGACTGGAATTGATTTTAAACGGAGAGAGGCCTATCTGTCAGATGAAGATTTTCAAACTGTATTTGGAATGACGAAAGAAGCATTCTATAAATTGCCAAAATGGAAGCAAGACATGCAGAAAAGGAAAGCTGATTTGTTTTAG 2922 0.4155 MSSSTKVLDPAFQAVGQKVGTEIWRIENFQPVLLPKSEYGKFYTGDSYIILQTTQGKGGAYFYDIHFWIGKDTSQDEAGTAAIKTVELDAALGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFRKPEEEQFETRLYICKGKRVVPFARSSLNHDDVFILDTQNKIYQFNGANSNIQERAKALEVIQFLKEKYHEGKCDIAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVINEDDIIPEATPAQLYCIIDGEVNPVEGELSKSLLENNKCYLLDCGAEVFIWVGRVTQVEERKAACQAAEEFVASQNRPKSTRITRIIQGYETHSFKSNFDSWPSGSAATGAEEGRGKVAALLKQQGMGVKGMTKNTPVNEEIPPLLEGGGKMEVWLINGSAKNPLPKEDIGKFYSGDCYIVLYTYHSGERKEDYFLCCWFGKDSFEEDQRMATRLASTMFNSLKGRPVQGRIFEGKEPPQFIALFQPMVVLKGGLSSGYKKFITEKGLPNETYTAECIALIRISGTSIHNNKAVQVDALATSLNSTECFLLQSGSSVFTWHGSQCSFEQQQLAAKVAEFLKPGVSLKHAKEGTESSAFWFALGGKHGYNSKKASNDIVRDPHLFSFSLNKEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSADSKEKQNVFEIVQKYIDMAASLEGLSPHVPLYKVTEGNEPCFFTTYFSWDHLKATVQGNSFQKKVSLLFGIGHAVEDKSNGSSQGGPRQRAEALAALSSAFSSSSEKTSSTAQDRLNGLNQGGPRQRAEALAALNSAFNSSSGSKTVVSRPSGTSQGSQRAAAVAALSNVLTAEKKKHSPDASPPGASSSPVAESSTSEAKSESGHSETEGPEEVAEAKETEGVAPEAGSNGDLEPKQENVEDGNDSQISQSTFSYDQLKTKSDKPVTGIDFKRREAYLSDEDFQTVFGMTKEAFYKLPKWKQDMQKRKADLF 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1360 973 Gene3D Severin 518 608 IPR029006 -
Glsi11g1360 973 PANTHER VILLIN 3 963 IPR007122 GO:0051015
Glsi11g1360 973 CDD gelsolin_S2_like 138 227 - -
Glsi11g1360 973 Gene3D Severin 609 725 IPR029006 -
Glsi11g1360 973 SUPERFAMILY VHP, Villin headpiece domain 909 973 IPR036886 GO:0003779|GO:0007010
Glsi11g1360 973 FunFam Villin-4 243 349 - -
Glsi11g1360 973 SUPERFAMILY Actin depolymerizing proteins 378 523 - -
Glsi11g1360 973 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Glsi11g1360 973 CDD gelsolin_S4_like 381 482 - -
Glsi11g1360 973 MobiDBLite consensus disorder prediction 843 860 - -
Glsi11g1360 973 Pfam Gelsolin repeat 149 212 IPR007123 -
Glsi11g1360 973 Pfam Gelsolin repeat 628 703 IPR007123 -
Glsi11g1360 973 Pfam Gelsolin repeat 400 479 IPR007123 -
Glsi11g1360 973 Pfam Gelsolin repeat 527 578 IPR007123 -
Glsi11g1360 973 Pfam Gelsolin repeat 31 111 IPR007123 -
Glsi11g1360 973 Pfam Gelsolin repeat 259 332 IPR007123 -
Glsi11g1360 973 CDD gelsolin_S1_like 12 124 - -
Glsi11g1360 973 SMART VHP_1 938 973 IPR003128 GO:0003779|GO:0007010
Glsi11g1360 973 MobiDBLite consensus disorder prediction 799 926 - -
Glsi11g1360 973 Gene3D Severin 242 350 IPR029006 -
Glsi11g1360 973 SUPERFAMILY Actin depolymerizing proteins 218 340 - -
Glsi11g1360 973 ProSiteProfiles Headpiece (HP) domain profile. 908 973 IPR003128 GO:0003779|GO:0007010
Glsi11g1360 973 FunFam Gelsolin 514 608 - -
Glsi11g1360 973 SMART VILL_6 515 602 IPR007122 GO:0051015
Glsi11g1360 973 SMART VILL_6 247 339 IPR007122 GO:0051015
Glsi11g1360 973 SMART VILL_6 387 485 IPR007122 GO:0051015
Glsi11g1360 973 SMART VILL_6 19 117 IPR007122 GO:0051015
Glsi11g1360 973 SMART VILL_6 616 709 IPR007122 GO:0051015
Glsi11g1360 973 SMART VILL_6 139 229 IPR007122 GO:0051015
Glsi11g1360 973 Pfam Villin headpiece domain 938 973 IPR003128 GO:0003779|GO:0007010
Glsi11g1360 973 CDD gelsolin_S3_like 249 338 - -
Glsi11g1360 973 MobiDBLite consensus disorder prediction 903 922 - -
Glsi11g1360 973 MobiDBLite consensus disorder prediction 761 785 - -
Glsi11g1360 973 FunFam Gelsolin 6 131 - -
Glsi11g1360 973 Gene3D Villin headpiece domain 897 973 IPR036886 GO:0003779|GO:0007010
Glsi11g1360 973 MobiDBLite consensus disorder prediction 761 780 - -
Glsi11g1360 973 CDD gelsolin_S5_like 515 602 - -
Glsi11g1360 973 CDD gelsolin_S6_like 617 710 - -
Glsi11g1360 973 PRINTS Gelsolin family signature 528 548 IPR007122 GO:0051015
Glsi11g1360 973 PRINTS Gelsolin family signature 635 657 IPR007122 GO:0051015
Glsi11g1360 973 PRINTS Gelsolin family signature 588 607 IPR007122 GO:0051015
Glsi11g1360 973 PRINTS Gelsolin family signature 318 339 IPR007122 GO:0051015
Glsi11g1360 973 PRINTS Gelsolin family signature 406 422 IPR007122 GO:0051015
Glsi11g1360 973 PRINTS Gelsolin family signature 432 450 IPR007122 GO:0051015
Glsi11g1360 973 PRINTS Gelsolin family signature 664 683 IPR007122 GO:0051015
Glsi11g1360 973 PRINTS Gelsolin family signature 465 485 IPR007122 GO:0051015
Glsi11g1360 973 SUPERFAMILY Actin depolymerizing proteins 591 708 - -
Glsi11g1360 973 Gene3D Severin 133 241 IPR029006 -
Glsi11g1360 973 MobiDBLite consensus disorder prediction 799 825 - -
Glsi11g1360 973 Gene3D Severin 383 517 IPR029006 -
Glsi11g1360 973 SUPERFAMILY Actin depolymerizing proteins 129 232 - -
Glsi11g1360 973 MobiDBLite consensus disorder prediction 861 881 - -
Glsi11g1360 973 Gene3D Severin 5 132 IPR029006 -
Glsi11g1360 973 SUPERFAMILY Actin depolymerizing proteins 506 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1360 Glsi-ChrGlsi11 8518025 8528512 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2340 02 73748017 73748820 Glsi11g1360 11 8518025 8528512 CCT
Glsi11g1360 11 8518025 8528512 Glsi11g1360 11 8518025 8528512 ECH