Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1263 ATGGCTAGAATTGGCGAGGGCGACCAGCGCTGGATCGTGGAGGATAGGGCTGATGGTACCAACGTCCACAATTGGCACTGGGCCGAAACCGACTGTCTCGAATGGTCCAGGAATCTCTTCAACAAGCTTCTCTCCAATCTCACGGTTCTTGATGGCGAGGCCAACTTATACATCACGACCAATAAGGTCGACAAGGTAGAAGGCGAGGCCTATGTCAATGTGCGAAAGGGTAAGATTATCCCCGGCTATGAAATCAGTCTCGTAGTGTCTTGGGAAGGAGAAGCCAAGGATTTGGAGGGCAAATGTTTGCTCAAGGTCGATGGGACTGTGGAAATTCCCTATATCTCGGACGAGAATGCCGATGAGGATCCTGAACTTAAGGTCACTATCAAGGATGAAGGGCCCGTTGGCAAGAGGTTGAAGGAGGCAATGATTTCCCAGGGTAAGCCTTTAATCCTAGAGAAAGTTAAGGTCTGGGTGGAGGCTATGGCGAAAGGTGGGCCTGTCAAAGACGAGTTGGAGACCAAGAAATTAACTCCGCAAAATCGTGCTGCCTCAACTCCGGTCACGGCGGCAAAGAAGGAGGTTGCAATGGAGAAGGAGAAGGAGAAAGAGAAGGAGAAGCCCAAGAAAGGAAGTAAGAAAGGTTGTAAAACAATCACCTTGACGGAGAAGTTTAGTTGCCGGGCAAGAGATTTATATGAGATATTGATGGACGAGAATAGGTGGAAAGGTTTTACGCAGAGCAATGCTAGAATAAGCAAGGATGTTGGTGGAGAGTTTTTCATTTTCGATGGGTCAGTGACCGGAACTAATGTAGAGTTGCAGGAAGCTAAACTGATTGTGCAGAAATGGAGATTCGGGAGCTGGCCTGATGGGATGCAGTCTTTGGTAAGACTTGTGTTTGAGGAACCTGAACCAGGGCTTACGATCATCAAGCTGACACATACGGATGTGCCCGAAGAAGACAGATACGGAAATGCCACTGTGGTGGAGAACACGGAGAGAGGATGGAGGGATCTCATTTTCCAAAGGATACGGGCAGTTTTTGGTTTTGGACTCTGA 1065 0.4845 MARIGEGDQRWIVEDRADGTNVHNWHWAETDCLEWSRNLFNKLLSNLTVLDGEANLYITTNKVDKVEGEAYVNVRKGKIIPGYEISLVVSWEGEAKDLEGKCLLKVDGTVEIPYISDENADEDPELKVTIKDEGPVGKRLKEAMISQGKPLILEKVKVWVEAMAKGGPVKDELETKKLTPQNRAASTPVTAAKKEVAMEKEKEKEKEKPKKGSKKGCKTITLTEKFSCRARDLYEILMDENRWKGFTQSNARISKDVGGEFFIFDGSVTGTNVELQEAKLIVQKWRFGSWPDGMQSLVRLVFEEPEPGLTIIKLTHTDVPEEDRYGNATVVENTERGWRDLIFQRIRAVFGFGL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1263 354 CDD SRPBCC_Aha1 219 352 - -
Glsi11g1263 354 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Glsi11g1263 354 Pfam Activator of Hsp90 ATPase, N-terminal 29 165 IPR015310 GO:0001671|GO:0051087
Glsi11g1263 354 Pfam Activator of Hsp90 ATPase homolog 1-like protein 230 350 IPR013538 -
Glsi11g1263 354 MobiDBLite consensus disorder prediction 194 215 - -
Glsi11g1263 354 SUPERFAMILY Bet v1-like 219 353 - -
Glsi11g1263 354 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 2 165 IPR015310 GO:0001671|GO:0051087
Glsi11g1263 354 MobiDBLite consensus disorder prediction 179 215 - -
Glsi11g1263 354 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
Glsi11g1263 354 Gene3D - 216 353 IPR023393 -
Glsi11g1263 354 Gene3D - 18 177 IPR036338 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1263 Glsi-ChrGlsi11 7947026 7948283 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2438 02 74426168 74427420 Glsi11g1263 11 7947026 7948283 CCT
Glsi11g1263 11 7947026 7948283 Glsi11g1263 11 7947026 7948283 ECH