Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1173 ATGGAGGAGACGAAATCCAGGTTCAAGCGGATTGGTGTCTTCTGTGGGAGCAGTTCTGGGAAGAAAGCTAGCTACCAAGAGGCTGCTGTAGAACTCGGGAAGGAACTGGTGGAGAGAAGGATTGATTTGGTCTACGGAGGTGGAAGCGTGGGCTTGATGGGTCTCGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTAGGGGTTATTCCCAGAACTCTCATGCCAAGAGAGATAACTGGTGATCCTGTTGGAGAAGTGAGAACCGTATCTGACATGCACCAAAGGAAAGCTGAGATGGCTCGACAAGCTGATGCCTTCATTGCCCTCCCTGGAGGATATGGAACCCTTGAGGAATTGCTGGAAGTCATTACATGGGCTCAGCTTGGGATCCATCGCAAGCCTGTGGGGCTGTTGAATGTTGATGGTTACTACAATTCCTTGTTGTCGTTCATTGATAAAGCCGTTGATGAAGGCTTTATCTCCCCCACGGCACGTCGCATTATCGTGTCTGCACCCACAGCCAAACAATTGGTCAGAGAGCTTGAGGAACATGTACCTGAGCAAGATGAGGTGGTGTCCAAGTTGGTTTGGGAAGACAGACTGAATTTCATGCCTGAATCAGAGGTTGCCATGTGA 642 0.5 MEETKSRFKRIGVFCGSSSGKKASYQEAAVELGKELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPRTLMPREITGDPVGEVRTVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLSFIDKAVDEGFISPTARRIIVSAPTAKQLVRELEEHVPEQDEVVSKLVWEDRLNFMPESEVAM 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1173 213 Pfam Possible lysine decarboxylase 53 182 IPR031100 -
Glsi11g1173 213 NCBIfam Rossman fold protein, TIGR00730 family 10 185 IPR005269 GO:0009691|GO:0016787
Glsi11g1173 213 Gene3D - 1 185 - -
Glsi11g1173 213 PANTHER LOG FAMILY PROTEIN YJL055W 3 203 - -
Glsi11g1173 213 SUPERFAMILY MCP/YpsA-like 7 186 - -
Glsi11g1173 213 FunFam CASP-like protein 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1173 Glsi-ChrGlsi11 7339508 7342911 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2549 02 75266219 75272390 Glsi11g1173 11 7339508 7342911 CCT
Glsi11g1173 11 7339508 7342911 Glsi11g1173 11 7339508 7342911 ECH