Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1067 ATGGGGGGCGAAACGGTGAACGGCTCATGGTTCAGTGCTTTGTGGCCACTCTCCCGCAAGACTGCGTCGGATGACAAGGCGGTAATTGGAATTTTGGCGTCAGAAGTTTCCGGCTTGATGTTGAAGTTGGTTAATTTATGGCATTCTTTGAGTGACAAGGAGGCAATGAGTCTGAGGGAAGAGATAGTAAACTTGGTTGGGGTCAAAATGCTGGTATCTGAAGATGATGGTTTCTTGATGGAGCTTGCATTGAATGAGATACTCGATAACTTCAAATCCTTAGCCAGGTCTGTGGCCAGGTTGGGTAAGAGGTGCGAGGATCCAGTATATCATCGTTATGAACAATTTCTTGATAACCCAGCTCAGAATTGTTTCCAATGGTCTGGGTGGGAATATAGATGGAAAAAGATGGAAAGGAAGGTGAAGAAAATGGAAAGATTTATTGCTGCTATGACACAATTTTCCTACGAGCTTGGAATACTAGCAGAGCATGAACAGACCTTCAGGAGAATGCAGGCAAATCCTGAGACGAATCGGGTGAAATTGCTTGAGTTTCAGAAAAAGGTCATGTGGCAGCGCCAGGAAGTGAGAAATCTGAGAGACATGTCTCCATGGAATAGAAGTTACGATTATATTGTCCGATTGTTGGCAAGATCACTATTTACAATACTAGAGAGGATCGTACATGTCTTTGGAAACAATTATCTGCCAACTGAACAGCAACAAAATGATTGTAAATATATGAATATTAATCATCTTCCCCGCAGCAATTCCTTCTCTACTCTTTTGCATTCTCACGTTCATCCATCACAGAATGACCCACATGGCTTCCATTCAGGACATCTTGGGAGGAGACAGATGTCAAATTCAGGCTTTGTGGTTGACAAGAGCAAAAGAAAGAACAAACAGCAGCAAGCTCTTCCCCATTCAGAAAGCAAGCAGTTGGGAAACATGGGGCCCTTTAAAGGATGCATGTCTGCAGGAAATGATTCTCCCGTCGTGCGTAGCTGTATGGCAACTGGTGGTTCTATGAGAGTGAGTGATTGTTATCTGAAAAATGCAGATAAATTACTTCTCTTTAACCGGATGAAAATATATTCTAAATTATCCATTAATGGTCGGTTAAGGGCAGCTCCAAAAACCCTTGGTGATGCTGCTTTAGCTCTCCGCTATGCAAATGTGATTATATTGATTGAGAGGATGGTGTCATCACCTCACCTGATTGATCTTGAAACCAGGGATGATCTGTACAATATGTTACCTGCAACAATAAGAAGGGCTCTGAGGGCTAAGCTTAAGTGGTGTGCCAAAAGCAAAGATTCTTGGATCTATGGTGCTAACCTTGCAGCAGGATGGAGGACGGTACTGACGCAGATTTTAGAATGGCTGGCTCCACTCGCTCATAACATGATAAAGTGGCATTCTGAGAGGAATTTCCAGAAGGAGCATACAACTTCGAAAGCAAAAATTTTACTCGTCCAGACTCTTCACTTTGCAAACCAATCAAAAGCTGAAGCCGCAATTATGCAACTTCTTGTTGGTCTCAACTATGTGTGCAGGATTGATAAAGAAGTTGGCATAAGAGATACACCCGAGTTTTTTTGGCACCAGAGCTTGTAA 1620 0.4278 MGGETVNGSWFSALWPLSRKTASDDKAVIGILASEVSGLMLKLVNLWHSLSDKEAMSLREEIVNLVGVKMLVSEDDGFLMELALNEILDNFKSLARSVARLGKRCEDPVYHRYEQFLDNPAQNCFQWSGWEYRWKKMERKVKKMERFIAAMTQFSYELGILAEHEQTFRRMQANPETNRVKLLEFQKKVMWQRQEVRNLRDMSPWNRSYDYIVRLLARSLFTILERIVHVFGNNYLPTEQQQNDCKYMNINHLPRSNSFSTLLHSHVHPSQNDPHGFHSGHLGRRQMSNSGFVVDKSKRKNKQQQALPHSESKQLGNMGPFKGCMSAGNDSPVVRSCMATGGSMRVSDCYLKNADKLLLFNRMKIYSKLSINGRLRAAPKTLGDAALALRYANVIILIERMVSSPHLIDLETRDDLYNMLPATIRRALRAKLKWCAKSKDSWIYGANLAAGWRTVLTQILEWLAPLAHNMIKWHSERNFQKEHTTSKAKILLVQTLHFANQSKAEAAIMQLLVGLNYVCRIDKEVGIRDTPEFFWHQSL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1067 539 PANTHER BNAC09G50660D PROTEIN 23 525 - -
Glsi11g1067 539 MobiDBLite consensus disorder prediction 295 318 - -
Glsi11g1067 539 Pfam Protein of unknown function (DUF668) 381 472 IPR007700 GO:0045927
Glsi11g1067 539 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1067 Glsi-ChrGlsi11 6691605 6693224 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2677 02 76336847 76338559 Glsi11g1067 11 6691605 6693224 CCT
Glsi11g1067 11 6691605 6693224 Glsi11g1067 11 6691605 6693224 ECH