Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1062 ATGCATTCCTCTCACTTGCTTCTTGAAGAACCTATTAGGATGGCCTCTATGCTAGAGCCATCCAAGGCTACTTTCTTTCCTGCAATGACAAAAATCGTCGGCACTCTAGGTCCTAAATCTCGATCAACAGAGGTTATAGCTGGCTGTCTCAAGGCTGGCATGTCTGTGGCTCGTTTCGACTTTTCTTGGGGTGACCCGGAATATCACCAGGAGACCTTGGAGAATTTGAAGACTGCTGTCAAGAGTACAAAGAAGCTTTGTGCTGTTATGCTGGACACGGTGGGTGCAGAGATGCAGGTTGTTAACAAAAGTGAGAAATCTATTTCCCTTAAGGCAGATGGCCTTGTTGTTCTAACTCCAGACCAGGGACAAGAAGCTTCTTCTGAGATATTGCCCATCAATTTTGATGGACTAGCAAAGTCAGTGAAGGAGGGAGATACCATTTTTATTGGTCAATACTTGTTCACCGGAAGTGAGACTACTTCTGTATGGCTAGAGGTAGCTGAAATCCAAGGGCAGGACGTGGTTTGTGTTATAAAGAATTCTGCCACATTGGCTGGGTCATTGTTCACTTTGCATGCCTCTCAAATTCATATTGATTTGCCTACCCTCACTGAGAAAGATAAGGAGGTTATAAGCACTTGGGGAGTTAAAAACAAAATCGATTTTCTATCATTGTCATATACTCGACATGCAGAAGATGTTCGTCAGGCTCGTGAATTCCTTTGTAAGTTAGGTGATCTCAGCCAGACTCAAATTTTGGCAAAGATTGAAAACGTTGAGGGATTGGCCCATTTTGATGAAATCCTACAAGAAGCTGATGGAATTATCCTTTCTCGTGGGAATTTGGGCATTGATCTTCCATCTGAGAAGGTATTTTTGTTTCAAAAATCTGCCCTTTACAAGTGTAATATGGCTGGGAAACCTGCTGTGCTTACACGTGTTGTGGATAGCATGACTGACAATGTAAGGCCAACTCGTGCTGAAGCCACTGATGTTGCCAATGCTGTTTTAGATGGTAGTGATGCAATACTTCTGGGTGCTGAGACCCTGCGTGGATTATACCCTGTTGAGACTATTTCTACTGTTGGCAAAATTTGTGCTGAGGCTGAGAAAGTTTTCAACCAAGATCTGTATTTTAAGAGGACTGTCAAATATGTTGGAGAACCAATGACCCACTTGGAATCTATTGCATCCTCTGCGGTACGGGCAGCTATTAAGGTGAAGGCTTCTGTTATAATTTGCTTCACTTCATCTGGAAGGGCTGCAAGATTAATAGCGAAGTATAGGCCTACGATGCCAGTTCTCTCTGTTGTGATCCCTCGACTTAAGACTGATCAGCTAAAGTGGAGCTTTAGTGGAGCCTTTGAGGCGAGGCAATCACTTATCGTAAGAGGTCTCTTTCCCATGCTTGCTGATCCTCGACATCCTGCGGAGTCAACAAGTGCAACAAATGAGTCTATTCTCAAGATTGCCCTTGACCACGGAAAAGCATCAGGAGTTATAAAGTCACATGACCGAGTTGTTGTTTGCCAGAAAGTTGGTGATACATCTGTTGTTAAGATCATTGAGCTTGAAGATTAA 1584 0.4337 MHSSHLLLEEPIRMASMLEPSKATFFPAMTKIVGTLGPKSRSTEVIAGCLKAGMSVARFDFSWGDPEYHQETLENLKTAVKSTKKLCAVMLDTVGAEMQVVNKSEKSISLKADGLVVLTPDQGQEASSEILPINFDGLAKSVKEGDTIFIGQYLFTGSETTSVWLEVAEIQGQDVVCVIKNSATLAGSLFTLHASQIHIDLPTLTEKDKEVISTWGVKNKIDFLSLSYTRHAEDVRQAREFLCKLGDLSQTQILAKIENVEGLAHFDEILQEADGIILSRGNLGIDLPSEKVFLFQKSALYKCNMAGKPAVLTRVVDSMTDNVRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGKICAEAEKVFNQDLYFKRTVKYVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTDQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSATNESILKIALDHGKASGVIKSHDRVVVCQKVGDTSVVKIIELED 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1062 527 Gene3D - 363 525 IPR036918 -
Glsi11g1062 527 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 7 375 IPR015813 GO:0003824
Glsi11g1062 527 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi11g1062 527 FunFam Pyruvate kinase 96 202 - -
Glsi11g1062 527 NCBIfam pyruvate kinase 30 518 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi11g1062 527 SUPERFAMILY PK beta-barrel domain-like 103 186 IPR011037 -
Glsi11g1062 527 SUPERFAMILY PK C-terminal domain-like 358 524 IPR036918 -
Glsi11g1062 527 FunFam Pyruvate kinase 371 513 - -
Glsi11g1062 527 Gene3D - 30 362 IPR040442 -
Glsi11g1062 527 Pfam Pyruvate kinase, alpha/beta domain 395 523 IPR015795 -
Glsi11g1062 527 Gene3D - 97 201 IPR015806 GO:0004743|GO:0006096
Glsi11g1062 527 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi11g1062 527 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi11g1062 527 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi11g1062 527 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi11g1062 527 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi11g1062 527 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi11g1062 527 PANTHER PYRUVATE KINASE 23 513 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1062 Glsi-ChrGlsi11 6657791 6664397 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g0698 12 23569408 23590444 Glsi11g1062 11 6657791 6664397 CCT
Glsi11g1062 11 6657791 6664397 Glsi11g1062 11 6657791 6664397 ECH