Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1060 ATGGGAGCCTCGCTATCCACCTTGGGAACCAGCGGTGCAACCCTTGGTCCGGGACTTGGGGACATCCCGGAGAACTGTGTGGCTTGCGTTTTTCTGTATTTGACTCCGCCGGAGATTTGCAATTTGGCACGCCTCAATCGAGCCTTCCGTGGTGCGGCCTCCGCTGATTCCGTGTGGGAAGCAAAGTTGCCCCCTAACTACCAAAATCTGCTCCACTTAGTACCTCCCGAAAGTTACCAGAATTTATCCAAGAAGGACATATTCGCGCTACTTTCTCGACCAATTCCACTTGACAACCCCAACAAGGTGCGTGCTCTTCAGGAAGTTTGGCTGGACAAGGTCACGGGAAGGGTATGCATGTCCATATCGGCAAAAGCGATGGCAATTACTGGAATTGTTGACCGGAGATACTGGAATTGGATTCCTACCGAAGAATCTAGGTTCCAAACTGTGGCTTATTTGCAGCAAATATGGTGGTTCGAAGTGGATGGGGAGGTAAAGTTTCCCTTTCCCGCTGATAATTATACTCTCTGCTTCAGGCTTCACCTTGGAAGATTTTCCAGAAGGCTTGGACGGCGAGTATGCAATTATGAACACACCCATGGTTGGGATATAAAACCAGTGAGATTTGAGTTGTCAACTACTGATGGTCAGCAAGCCTTGTGTGAGTGCTGTTTGGATGAAAATGAGCACGATGATGCATATGGCAATCATAAGCGTGGATACTGGGTAAATTACAAGGTGGGTGAATTTGTTGTCAGTGGATCAGAACCTACAACTGAAGTCAGATTCTCCATGAAACAGATCGATTGTACACATTCCAAAGGTGGGCTTTGTGTAGATTCTGTATTTATTATACCTAGTAATTTGAAAGATCGTAAGAGAAAAGGCATTTTCAAGAAGCCACACGCAGAATATAGAGGTTCCTTTTGGTAA 936 0.4626 MGASLSTLGTSGATLGPGLGDIPENCVACVFLYLTPPEICNLARLNRAFRGAASADSVWEAKLPPNYQNLLHLVPPESYQNLSKKDIFALLSRPIPLDNPNKVRALQEVWLDKVTGRVCMSISAKAMAITGIVDRRYWNWIPTEESRFQTVAYLQQIWWFEVDGEVKFPFPADNYTLCFRLHLGRFSRRLGRRVCNYEHTHGWDIKPVRFELSTTDGQQALCECCLDENEHDDAYGNHKRGYWVNYKVGEFVVSGSEPTTEVRFSMKQIDCTHSKGGLCVDSVFIIPSNLKDRKRKGIFKKPHAEYRGSFW 311
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1060 311 Pfam Phloem protein 2 118 287 IPR025886 -
Glsi11g1060 311 SUPERFAMILY F-box domain 17 74 IPR036047 GO:0005515
Glsi11g1060 311 PANTHER F-BOX PROTEIN PP2-A15 7 295 - -
Glsi11g1060 311 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Glsi11g1060 311 CDD F-box_AtSKIP3-like 19 64 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi11g1060 Glsi-ChrGlsi11 6643369 6646009 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2686 02 76376844 76380512 Glsi11g1060 11 6643369 6646009 CCT
Glsi11g1060 11 6643369 6646009 Glsi11g1060 11 6643369 6646009 ECH